RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 NT5DC2Q9H857 520 aa9□□□□□ -0.97
HERC1-206ENST00000559996 C1GALT1Q9NS00 363 aa9□□□□□ -0.97
HERC1-206ENST00000559996 FARSBQ9NSD9 589 aaKnown RBP9□□□□□ -0.97
HERC1-206ENST00000559996 TRPS1Q9UHF7 1281 aa9□□□□□ -0.97
HERC1-206ENST00000559996 TSC22D4Q9Y3Q8 395 aa9□□□□□ -0.97
HERC1-206ENST00000559996 TRAF6Q9Y4K3 522 aa9□□□□□ -0.97
HERC1-206ENST00000559996 DNAJC15Q9Y5T4 150 aa9□□□□□ -0.97
HERC1-206ENST00000559996 MDC1Q14676 2089 aaKnown RBP9□□□□□ -0.97
HERC1-206ENST00000559996 RIF1Q5UIP0 2472 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 ZNF292O60281 2723 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 A0A0J9YY10 115 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 FEZF1A0PJY2 475 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 GSAPA4D1B5 854 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 PABPN1LA6NDY0 278 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 SLC9B1P1A6NJY1 282 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 RNF223E7ERA6 249 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 H3BMH7 237 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 MATN2O00339 956 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 HAT1O14929 419 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 CLGNO14967 610 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 TGDSO95455 350 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 RPLP0P05388 317 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 CAPN1P07384 714 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 ALOX15P16050 662 aaPredicted RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 CMPK1P30085 196 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 BCL6P41182 706 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 SCTRP47872 440 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 RPL14P50914 215 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 NEK2P51955 445 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 DAB2P98082 770 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 REEP5Q00765 189 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 IRF8Q02556 426 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 HYAL2Q12891 473 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 PRKAA1Q13131 559 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 ABRAXAS2Q15018 415 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 ZRSR2Q15696 482 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 RBBP7Q16576 425 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 CPSF6Q16630 551 aaKnown RBP eCLIP8.99□□□□□ -0.97
HERC1-206ENST00000559996 SH2D4BQ5SQS7 431 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 THEMIS2Q5TEJ8 643 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 RNF165Q6ZSG1 346 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 FAM92BQ6ZTR7 304 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 GPRIN3Q6ZVF9 776 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 MTERF4Q7Z6M4 381 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 TMPRSS11BQ86T26 416 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 PLD3Q8IV08 490 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 SLITRK4Q8IW52 837 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 WDR75Q8IWA0 830 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 ARHGEF39Q8N4T4 335 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 CDYL2Q8N8U2 506 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 OR7G3Q8NG95 312 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 PPP1R14CQ8TAE6 165 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 PIWIL2Q8TC59 973 aaKnown RBP8.99□□□□□ -0.97
HERC1-206ENST00000559996 CREB3L4Q8TEY5 395 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 TM4SF19Q96DZ7 209 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 CHMP6Q96FZ7 201 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 SLC41A2Q96JW4 573 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 TGM7Q96PF1 710 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 FCRL4Q96PJ5 515 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 OR2A5Q96R48 311 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 CHRNA10Q9GZZ6 450 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 KLHL25Q9H0H3 589 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 RHBGQ9H310 441 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 SEMA6CQ9H3T2 930 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 ENAMQ9NRM1 1142 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 FGFR1OP2Q9NVK5 253 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 FTSJ1Q9UET6 329 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 DYRK1BQ9Y463 629 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 ANGPTL3Q9Y5C1 460 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 PTGDR2Q9Y5Y4 395 aa8.99□□□□□ -0.97
HERC1-206ENST00000559996 LOC105369274A0A096LPK9 316 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 LOC102723532A0A0G2JNH3 316 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 IGHV5-10-1A0A0J9YXX1 117 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 GMNCA6NCL1 334 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 TLCD2A6NGC4 264 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 SRRM3A6NNA2 597 aaPredicted RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 MANBAO00462 879 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 FFAR3O14843 346 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 AZIN1O14977 448 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 GPR42O15529 346 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 KLHL18O94889 574 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 SNUPNO95149 360 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 ETHE1O95571 254 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 CPNE6O95741 557 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 HSPA4LO95757 839 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 PDYNP01213 254 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 ENO1P06733 434 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 KITP10721 976 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 UROSP10746 265 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 THRAP10827 490 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 NEFHP12036 1026 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 HGFP14210 728 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 HRH2P25021 359 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 HNF4AP41235 474 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 CCR8P51685 355 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 BTKQ06187 659 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 SLBPQ14493 270 aaKnown RBP eCLIP8.98□□□□□ -0.97
HERC1-206ENST00000559996 TRIP6Q15654 476 aaKnown RBP8.98□□□□□ -0.97
HERC1-206ENST00000559996 CDCP2Q5VXM1 449 aa8.98□□□□□ -0.97
HERC1-206ENST00000559996 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms