RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 LCA5Q86VQ0 697 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 TCAIMQ8N3R3 496 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 TEX9Q8N6V9 391 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 SNX31Q8N9S9 440 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 ZUFSPQ96AP4 578 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 WDR34Q96EX3 536 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 C10orf90Q96M02 699 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 CDK15Q96Q40 435 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 TAAR9Q96RI9 348 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 RUFY1Q96T51 708 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 SH3GL2Q99962 352 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 DDA1Q9BW61 102 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 C1QTNF3Q9BXJ4 246 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 PCBD2Q9H0N5 130 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 CENPHQ9H3R5 247 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 GSTO2Q9H4Y5 243 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 TMEM184CQ9NVA4 438 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 DCDC2Q9UHG0 476 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 ZNF490Q9ULM2 529 aaPredicted RBP10.42□□□□□ -0.74
TPM1-217ENST00000559108 PLCL2Q9UPR0 1127 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 PCDHGA4Q9Y5G9 962 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 AK5Q9Y6K8 562 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 AHCTF1Q8WYP5 2266 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 NUP210LQ5VU65 1888 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 POLR1CO15160 346 aaPredicted RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 KIAA0754O94854 1291 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 B3GALT4O96024 378 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 NTRK1P04629 796 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 C1GALT1C1LP0DN25 315 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 EZRP15311 586 aaKnown RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 ATP5F1P24539 256 aaPredicted RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 RORAP35398 523 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 SCTRP47872 440 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 ARL4DP49703 201 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 CCR8P51685 355 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 PRKAA2P54646 552 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 ACY1Q03154 408 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 GPS2Q13227 327 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 GTF2H2Q13888 395 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 PRTGQ2VWP7 1150 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.41□□□□□ -0.74
TPM1-217ENST00000559108 ZNF678Q5SXM1 525 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 FAM69BQ5VUD6 431 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 ATG9BQ674R7 924 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 GTF2H2CQ6P1K8 395 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 UNQ6494/PRO21346Q6UXR6 183 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 PRSS41Q7RTY9 318 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 C10orf107Q8IVU9 208 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.41□□□□□ -0.74
TPM1-217ENST00000559108 ZNF655Q8N720 491 aaPredicted RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 TM4SF19Q96DZ7 209 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 L3HYPDHQ96EM0 354 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 PKNOX2Q96KN3 472 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 ZFYVE21Q9BQ24 234 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 HAUS8Q9BT25 410 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 SARGQ9BW04 601 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 PELI2Q9HAT8 420 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 MLXIPLQ9NP71 852 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 SEMA4BQ9NPR2 832 aaPredicted RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 ENAMQ9NRM1 1142 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 SLC22A11Q9NSA0 550 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 ANKMY1Q9P2S6 941 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 COPG2Q9UBF2 871 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 OPTCQ9UBM4 332 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 RARRES3Q9UL19 164 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 SNX7Q9UNH6 387 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 RUVBL1Q9Y265 456 aaKnown RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 RNF11Q9Y3C5 154 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 TMEM184BQ9Y519 407 aaPredicted RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 PCDHGA7Q9Y5G6 932 aa10.41□□□□□ -0.74
TPM1-217ENST00000559108 MAP1BP46821 2468 aaKnown RBP10.41□□□□□ -0.74
TPM1-217ENST00000559108 SCN2AQ99250 2005 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 TRBC2A0A5B9 178 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 FITM1A5D6W6 292 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 PABPN1LA6NDY0 278 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 TERTO14746 1132 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 NVLO15381 856 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 ZNF749O43361 778 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 CNOT3O75175 753 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 DNAJB6O75190 326 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 SMIM24O75264 130 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 SCRG1O75711 98 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 OR2B3O76000 313 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 STK17BO94768 372 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 CCNDBP1O95273 360 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 EIF2S1P05198 315 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 MYZAPP0CAP1 466 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 DHRS4L1P0CG22 281 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 WT1P19544 449 aaPredicted RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 ALDH3A1P30838 453 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 PIK3CGP48736 1102 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 WDR4P57081 412 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 ERVPABLB-1P60509 514 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 MAGOHP61326 146 aaKnown RBP10.4□□□□□ -0.74
TPM1-217ENST00000559108 HERVK_113P63132 956 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 CYP4F2P78329 520 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 RELAQ04206 551 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 PCDH1Q08174 1060 aa10.4□□□□□ -0.74
TPM1-217ENST00000559108 CHIT1Q13231 466 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms