RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 VITQ6UXI7 678 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.25□□□□□ -0.77
CUX1-217ENST00000558836 SLCO4C1Q6ZQN7 724 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 ZDHHC13Q8IUH4 622 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 CSGALNACT1Q8TDX6 532 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 SGCDQ92629 289 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 MPP4Q96JB8 637 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 CCDC115Q96NT0 180 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 TMEM121BQ9BXQ6 578 aaPredicted RBP10.25□□□□□ -0.77
CUX1-217ENST00000558836 TRIM39Q9HCM9 518 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 AASDHPPTQ9NRN7 309 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 RAD18Q9NS91 495 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 SERGEFQ9UGK8 458 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 TMED5Q9Y3A6 229 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 OR1A2Q9Y585 309 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 KIF26AQ9ULI4 1882 aaPredicted RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 hCG_2039718K7EN88 272 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 MID1O15344 667 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 LINC01565O15544 149 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 ALBP02768 609 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 ALPLP05186 524 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 GJA4P35212 333 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 CAPGP40121 348 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 OPRD1P41143 372 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 SEC13P55735 322 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 IL1RL1Q01638 556 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 TAP2Q03519 686 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 DUS1LQ6P1R4 473 aaKnown RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 HEATR4Q86WZ0 1026 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 CHPFQ8IZ52 775 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 NRSN1Q8IZ57 195 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 MMP21Q8N119 569 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 RBM38Q9H0Z9 239 aaKnown RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 RWDD3Q9Y3V2 267 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 NINQ8N4C6 2090 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 DOCK8Q8NF50 2099 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 EPOPA6NHQ4 379 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 H0YIV9 168 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 QSOX1O00391 747 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 PAPLNO95428 1278 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 HOXB9P17482 250 aaPredicted RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 PRPH2P23942 346 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 SHMT2P34897 504 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 PIGAP37287 484 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 CYP4F2P78329 520 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 ELP6Q0PNE2 266 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 GTF2H3Q13889 308 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 KCNC3Q14003 757 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 DUOXA1Q1HG43 343 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 ZNF658BQ4V348 819 aaPredicted RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 ATG9BQ674R7 924 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 CAPN13Q6MZZ7 669 aaPredicted RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 TTC23LQ6PF05 361 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 RTL10Q7L3V2 364 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 UBE2Q1Q7Z7E8 422 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 GPR149Q86SP6 731 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 CALHM3Q86XJ0 350 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 TMIEQ8NEW7 156 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 WDR48Q8TAF3 677 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 CXorf40AQ8TE69 158 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 SNX19Q92543 992 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 NELL1Q92832 810 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 DUSP26Q9BV47 211 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 PBX4Q9BYU1 374 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 SLC6A17Q9H1V8 727 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 TOR3AQ9H497 397 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 VNN3Q9NY84 501 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 NFKBIL1Q9UBC1 381 aaPredicted RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 RUVBL1Q9Y265 456 aaKnown RBP10.24□□□□□ -0.77
CUX1-217ENST00000558836 MAN2B2Q9Y2E5 1009 aa10.24□□□□□ -0.77
CUX1-217ENST00000558836 MGAT4DA6NG13 374 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 EVPLLA8MZ36 301 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 SCELO95171 688 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 PAK4O96013 591 aaPredicted RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 RB1P06400 928 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 HNF4AP41235 474 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 CSTF3Q12996 717 aaKnown RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 DAG1Q14118 895 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 SHHQ15465 462 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 CPTPQ5TA50 214 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ZNF852Q6ZMS4 543 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 C11orf96Q7Z7L8 435 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 GALNT5Q7Z7M9 940 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 OR9A1PQ8NGU1 263 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 CIDECQ96AQ7 238 aaPredicted RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 PHF12Q96QT6 1004 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MYOCQ99972 504 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MBNL1Q9NR56 388 aaKnown RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 AASSQ9UDR5 926 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 RAPGEFL1Q9UHV5 662 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ZNF639Q9UID6 485 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ABCG2Q9UNQ0 655 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 WDR87Q6ZQQ6 2873 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MYO10Q9HD67 2058 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MYO1GB0I1T2 1018 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 PSMD11O00231 422 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 HS6ST1O60243 411 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 PCDH7O60245 1069 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MYO1DO94832 1006 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms