RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ALDH4A1P30038 563 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 RPS15AP62244 130 aaKnown RBP14.29□□□□□ -0.12
VPS18-202ENST00000558474 ABRAXAS2Q15018 415 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 SPRED1Q7Z699 444 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 PAQR7Q86WK9 346 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 ZNF761Q86XN6 746 aaPredicted RBP14.29□□□□□ -0.12
VPS18-202ENST00000558474 PARP9Q8IXQ6 854 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 DDIASQ8IXT1 998 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 CCDC74AQ96AQ1 378 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 EDEM2Q9BV94 578 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 ABCG4Q9H172 646 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 TUBB1Q9H4B7 451 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 TCF7L2Q9NQB0 619 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.29□□□□□ -0.12
VPS18-202ENST00000558474 SEMA5BQ9P283 1151 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 TRIM33Q9UPN9 1127 aa14.29□□□□□ -0.12
VPS18-202ENST00000558474 ARID1BQ8NFD5 2236 aaPredicted RBP14.29□□□□□ -0.12
VPS18-202ENST00000558474 TLCD2A6NGC4 264 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 ANKDD1BA6NHY2 528 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 FFAR3O14843 346 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 GPR42O15529 346 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 B4GAT1O43505 415 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 DIAPH2O60879 1101 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 SKAP2O75563 359 aaPredicted RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 RSL1D1O76021 490 aaKnown RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 LDOC1O95751 146 aaPredicted RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 PDYNP01213 254 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 C9P02748 559 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 CKMT2P17540 419 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 SCTRP47872 440 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 ARFIP1P53367 373 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 DAB2P98082 770 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 SPEM2Q0P670 501 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 MN1Q10571 1320 aaPredicted RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 MAD2L1Q13257 205 aaPredicted RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 SF3A2Q15428 464 aaKnown RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 SLC9B1Q4ZJI4 515 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 OGFOD2Q6N063 350 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 FIGLAQ6QHK4 219 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 LARP4Q71RC2 724 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS18-202ENST00000558474 ADCK2Q7Z695 626 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 TRPV3Q8NET8 790 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 WDR48Q8TAF3 677 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 BAHD1Q8TBE0 780 aaPredicted RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 THOC1Q96FV9 657 aaKnown RBP14.28□□□□□ -0.12
VPS18-202ENST00000558474 PPP3R2Q96LZ3 170 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 RABEP2Q9H5N1 569 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 HEATR5BQ9P2D3 2071 aa14.28□□□□□ -0.12
VPS18-202ENST00000558474 CAPN5O15484 640 aaPredicted RBP14.27□□□□□ -0.13
VPS18-202ENST00000558474 MAP3K7O43318 606 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 CLEC3AO75596 197 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 DCTN3O75935 186 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.13
VPS18-202ENST00000558474 LINC00032P0C843 101 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 PRR35P0CG20 571 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 ACPPP15309 386 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 CDH3P22223 829 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 ACP1P24666 158 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 PTX3P26022 381 aaPredicted RBP14.27□□□□□ -0.13
VPS18-202ENST00000558474 CD1CP29017 333 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 OR1D5P58170 312 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 YBX1P67809 324 aaKnown RBP14.27□□□□□ -0.13
VPS18-202ENST00000558474 IMPG1Q17R60 797 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 MANEAQ5SRI9 462 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 IRGCQ6NXR0 463 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 GUSBP11Q6P575 273 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 PRR23CQ6ZRP0 262 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 Q6ZSR9 355 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 KMT5CQ86Y97 462 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 MFSD9Q8NBP5 474 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 HUS1BQ8NHY5 278 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 NCSTNQ92542 709 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 TCTN2Q96GX1 697 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 CNDP2Q96KP4 475 aaKnown RBP14.27□□□□□ -0.13
VPS18-202ENST00000558474 RILPQ96NA2 401 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 SERPINI1Q99574 410 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 CCDC3Q9BQI4 270 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 EBF4Q9BQW3 602 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 ZFP69BQ9UJL9 534 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 BTRCQ9Y297 605 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 TMED5Q9Y3A6 229 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 CCL27Q9Y4X3 112 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 AP1M2Q9Y6Q5 423 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 CABIN1Q9Y6J0 2220 aa14.27□□□□□ -0.13
VPS18-202ENST00000558474 GOLGA8QA0A0J9YX86 632 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 GOLGA8OA6NCC3 632 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 GOLGA8NF8WBI6 632 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 DLL1O00548 723 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 OR1F1O43749 312 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 CCDC22O60826 627 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 PCNAP12004 261 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 CD59P13987 128 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 LBPP18428 481 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 MAGP20916 626 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 EPHA3P29320 983 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 HTR6P50406 440 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 MEF2AQ02078 507 aaPredicted RBP14.26□□□□□ -0.13
VPS18-202ENST00000558474 TUBB3Q13509 450 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 CUL3Q13618 768 aa14.26□□□□□ -0.13
VPS18-202ENST00000558474 RBBP5Q15291 538 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms