RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CCR10P46092 362 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CCR8P51685 355 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 RPS15AP62244 130 aaKnown RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 SKP1P63208 163 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 RELAQ04206 551 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 GPS2Q13227 327 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 ERV3-1Q14264 604 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 TSNQ15631 228 aaKnown RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PHKG1Q16816 387 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PTCHD3Q3KNS1 767 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PRAMEF17Q5VTA0 474 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 C1orf189Q5VU69 101 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PRMT9Q6P2P2 845 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 FAM199XQ6PEV8 388 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 BORAQ6PGQ7 559 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 RNF44Q7L0R7 432 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 SYVN1Q86TM6 617 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PAQR7Q86WK9 346 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 RAB43Q86YS6 212 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CEP97Q8IW35 865 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CSNK1A1LQ8N752 337 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 EIF1ADQ8N9N8 165 aaKnown RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CAMKVQ8NCB2 501 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 UHMK1Q8TAS1 419 aaKnown RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 SNRNP27Q8WVK2 155 aaKnown RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 WBP1Q96G27 269 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PRAP1Q96NZ9 151 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 YIPF2Q9BWQ6 316 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 VPS11Q9H270 941 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CHST8Q9H2A9 424 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 L2HGDHQ9H9P8 463 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PCMTD2Q9NV79 361 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CUEDC1Q9NWM3 386 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 DHCR7Q9UBM7 475 aaKnown RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 IL17BQ9UHF5 180 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 POLHQ9Y253 713 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PCDHGA6Q9Y5G7 932 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 KIF26BQ2KJY2 2108 aa7.96□□□□□ -1.13
PSEN1-223ENST00000557511 IQANK1A0A1B0GTG1 560 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CCDC189A1A4V9 331 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 HYKKA2RU49 373 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 URADA6NGE7 173 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SUPT3HB4E1H0 165 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 H0YGG7 62 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 PEX12O00623 359 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CLGNO14967 610 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 DSCR3O14972 297 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 NKX2-8O15522 239 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 ZNF500O60304 480 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SUPT3HO75486 399 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 FAM155BO75949 473 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 IPO13O94829 963 aaKnown RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 WDR47O94967 919 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 IGHEP01854 428 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 ABHD2P08910 425 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SLC35G6P0C7Q6 338 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CD1DP15813 335 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 TFEBP19484 476 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 RORAP35398 523 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 FOLR3P41439 243 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 AVPR1BP47901 424 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 GABRA4P48169 554 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 PGGT1BP53609 377 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 ARF3P61204 181 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 OCA2Q04671 838 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CDC20Q12834 499 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SRSF6Q13247 344 aaKnown RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 BMPR2Q13873 1038 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 EFTUD2Q15029 972 aaKnown RBP eCLIP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 NCF4Q15080 339 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 ZKSCAN8Q15776 578 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 HIST2H2ACQ16777 129 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 DEFB109BQ30KR1 87 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 NKAIN1Q4KMZ8 207 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CRTC2Q53ET0 693 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CDKL4Q5MAI5 379 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 GARNL3Q5VVW2 1013 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 HIST2H2AA3Q6FI13 130 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SULT1C3Q6IMI6 304 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SBSNQ6UWP8 590 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 TMEM207Q6UWW9 146 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 MBOAT1Q6ZNC8 495 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CMC1Q7Z7K0 106 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 THOC6Q86W42 341 aaKnown RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 KRT78Q8N1N4 520 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 ENDOVQ8N8Q3 282 aaKnown RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SNX31Q8N9S9 440 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 LSM14AQ8ND56 463 aaKnown RBP7.96□□□□□ -1.14
PSEN1-223ENST00000557511 OR56A3Q8NH54 315 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 ANKRD49Q8WVL7 239 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SLC5A11Q8WWX8 675 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 THAP4Q8WY91 577 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 EXT2Q93063 718 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 KIAA1191Q96A73 305 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 COL26A1Q96A83 441 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 PYCR2Q96C36 320 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 CRELD1Q96HD1 420 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 SCYL1Q96KG9 808 aa7.96□□□□□ -1.14
PSEN1-223ENST00000557511 IP6K3Q96PC2 410 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms