RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SLC9A3R1O14745 358 aaPredicted RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 LDB3O75112 727 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 CCNDBP1O95273 360 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 PMS2P2O95744 297 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 EGFP01133 1207 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 PIGRP01833 764 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 KRT19P08727 400 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 CSRP1P21291 193 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 PSMA4P25789 261 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ANXA13P27216 316 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 BDKRB2P30411 391 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 NMT1P30419 496 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 LHX1P48742 406 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 DHPSP49366 369 aaPredicted RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ACOT2P49753 483 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 PEX5P50542 639 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 SLC12A3P55017 1021 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 TFAMQ00059 246 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 GFPT1Q06210 699 aaPredicted RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 GOLGA8DPQ0D2H9 430 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ZNF155Q12901 538 aaPredicted RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 MTF1Q14872 753 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 MAPRE1Q15691 268 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 KRTAP27-1Q3LI81 207 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ATP13A5Q4VNC0 1218 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 HYIQ5T013 277 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 GFI1BQ5VTD9 330 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 WSCD1Q658N2 575 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 SIGIRRQ6IA17 410 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 DUS1LQ6P1R4 473 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 SPSB3Q6PJ21 355 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 C4orf50Q6ZRC1 276 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 STXBP4Q6ZWJ1 553 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 IKBIPQ70UQ0 350 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 DPPA4Q7L190 304 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 RABEPKQ7Z6M1 372 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 CHERPQ8IWX8 916 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 SYCP3Q8IZU3 236 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 HDDC3Q8N4P3 179 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 CSGALNACT2Q8N6G5 542 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 OR10T2Q8NGX3 314 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 SPATA22Q8NHS9 363 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ARHGEF2Q92974 986 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 RHBDF1Q96CC6 855 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 RRNAD1Q96FB5 475 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 TMEM68Q96MH6 324 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 DOCK7Q96N67 2140 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ACOX2Q99424 681 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 CMKLR1Q99788 373 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ACBD6Q9BR61 282 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 CHCHD6Q9BRQ6 235 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 PCGF1Q9BSM1 259 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 PI4K2AQ9BTU6 479 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 ECT2Q9H8V3 914 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 DDX43Q9NXZ2 648 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 C1RLQ9NZP8 487 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 CPSF3Q9UKF6 684 aaKnown RBP4.92□□□□□ -1.62
HIF1A-209ENST00000556827 MYO10Q9HD67 2058 aa4.92□□□□□ -1.62
HIF1A-209ENST00000556827 FAM186AA6NE01 2351 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 LIPT2A6NK58 231 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 H0Y626 953 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 MID1O15344 667 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 TRIM16O95361 564 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 IPO7O95373 1038 aaKnown RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ADRB2P07550 413 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 SRCP12931 536 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ATF6P18850 670 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ARL3P36405 182 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 LONP1P36776 959 aaKnown RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 RXRGP48443 463 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 HNRNPH2P55795 449 aaKnown RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ERVFC1-1P60608 527 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 RBP5P82980 135 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 GTF2BQ00403 316 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 HNRNPDQ14103 355 aaKnown RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 SPDYCQ5MJ68 293 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 EOGTQ5NDL2 527 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 TCEAL6Q6IPX3 200 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 NCEH1Q6PIU2 408 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 CLEC17AQ6ZS10 378 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 TRMT11Q7Z4G4 463 aaKnown RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ARHGAP12Q8IWW6 846 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 EFCAB13Q8IY85 973 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 BEST3Q8N1M1 668 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 SPATA18Q8TC71 538 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 WFIKKN2Q8TEU8 576 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 DUSP19Q8WTR2 217 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 NR4A3Q92570 626 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 TANKQ92844 425 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 TCEAL3Q969E4 200 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ORAI1Q96D31 301 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ARHGEF26Q96DR7 871 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 CEP295NLQ96MC4 621 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ACCSQ96QU6 501 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 FAM213AQ9BRX8 229 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 C1QTNF4Q9BXJ3 329 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 CCSER1Q9C0I3 900 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 MUC13Q9H3R2 512 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 LRRC4Q9HBW1 653 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms