RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PAQR3Q6TCH7 311 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 SPATA31D4Q6ZUB0 917 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ZC3H3Q8IXZ2 948 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 SLC15A3Q8IY34 581 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 TMEM156Q8N614 296 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ARNTL2Q8WYA1 636 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 RAB9BQ9NP90 201 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 GIN1Q9NXP7 522 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 DKK3Q9UBP4 350 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 NPIPA1Q9UND3 350 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 FKBP7Q9Y680 259 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 TLR4O00206 839 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 MANBAO00462 879 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 CPNE3O75131 537 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ERCC1P07992 297 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 DRD2P14416 443 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 LMO2P25791 158 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 STOMP27105 288 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 CASP9P55211 416 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 LSM3P62310 102 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF763Q0D2J5 394 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ARSIQ5FYB1 569 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 PPM1JQ5JR12 505 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 SIRPB2Q5JXA9 342 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 SLC8B1Q6J4K2 584 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 LGI4Q8N135 537 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 NXPE1Q8N323 547 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 NELL2Q99435 816 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 FZD4Q9ULV1 537 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 TESMINQ9Y4I5 508 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 HTR3EA5X5Y0 456 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PHYHO14832 338 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 DNAJB6O75190 326 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CSTBP04080 98 aaKnown RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 HOXB2P14652 356 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PLP2Q04941 152 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PUM1Q14671 1186 aaKnown RBP eCLIP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CXorf57Q6NSI4 855 aaKnown RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PAOXQ6QHF9 649 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 AGTRAPQ6RW13 159 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PRSS55Q6UWB4 352 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 C14orf80Q86SX3 495 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 RBM12BQ8IXT5 1001 aaKnown RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 SLC22A15Q8IZD6 547 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 METTL25Q8N6Q8 603 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 ZSCAN1Q8NBB4 408 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 METTL2AQ96IZ6 378 aaKnown RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 FBXL12Q9NXK8 326 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 TAS2R1Q9NYW7 299 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 A0A1W2PRU2 124 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 TMX2-CTNND1H3BSU7 103 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 GRID2O43424 1007 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 ACP5P13686 325 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 HSD11B1P28845 292 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 VLDLRP98155 873 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 MFSD13AQ14CX5 517 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 REEP3Q6NUK4 255 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 FTMTQ8N4E7 242 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 FBXO15Q8NCQ5 510 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 SMG8Q8ND04 991 aaKnown RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 LRRN4CLQ8ND94 238 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 OR5L2Q8NGL0 311 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 FAM174AQ8TBP5 190 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 MAPK15Q8TD08 544 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 NAT14Q8WUY8 206 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 FOXJ1Q92949 421 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CMKLR1Q99788 373 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PITHD1Q9GZP4 211 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 HOXD1Q9GZZ0 328 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 TAS2R9Q9NYW1 312 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 TVP23BQ9NYZ1 205 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PCDHGA10Q9Y5H3 936 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 HS3ST4Q9Y661 456 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CDH10Q9Y6N8 788 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PIRO00625 290 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 HPRP00739 348 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 UQCRC2P22695 453 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 MTTPP55157 894 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 NRG1Q02297 640 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 ZBED5Q49AG3 693 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 C2CD4AQ8NCU7 369 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 OR2L3Q8NG85 312 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CREB3L1Q96BA8 519 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 SLC7A6OSQ96CW6 309 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 ZDHHC18Q9NUE0 388 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 EPHA6Q9UF33 1036 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 HCN4Q9Y3Q4 1203 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 INPPL1O15357 1258 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 NOBOXO60393 691 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 GSTT2P0CG29 244 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 PET100P0DJ07 73 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 ANXA3P12429 323 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 RYKP34925 604 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF41P51814 821 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-216ENST00000556083 RHDQ02161 417 aa10.42□□□□□ -0.74
ACTN1-216ENST00000556083 CHRNA6Q15825 494 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms