RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 RALGDSQ12967 914 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 PRKG2Q13237 762 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 NONOQ15233 471 aaKnown RBP eCLIP3.07□□□□□ -1.92
SCFD1-216ENST00000555550 MS4A18Q3C1V0 323 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 IQCHQ86VS3 1027 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 FAM131BQ86XD5 332 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 RASGEF1AQ8N9B8 481 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 POMGNT2Q8NAT1 580 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 PIK3R3Q92569 461 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 TSACCQ96A04 125 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-216ENST00000555550 OTUB1Q96FW1 271 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-216ENST00000555550 HEXA-AS1Q9H8Q6 139 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 GSN-AS1Q9NRJ2 163 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 BAIAP2L1Q9UHR4 511 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 PRDM4Q9UKN5 801 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 FAM169AQ9Y6X4 670 aa3.07□□□□□ -1.92
SCFD1-216ENST00000555550 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 CASTOR2A6NHX0 329 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 CLDN4O14493 209 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 SURF4O15260 269 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 ATP5BP06576 529 aaKnown RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 AADACP22760 399 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 ALDH1B1P30837 517 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 CSE1LP55060 971 aaKnown RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 ZFP36L1Q07352 338 aaKnown RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 CD300CQ08708 224 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 RASGEF1BQ0VAM2 473 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 ZNF177Q13360 481 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 SNTB1Q13884 538 aaKnown RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 MAPRE1Q15691 268 aaKnown RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 NPTX1Q15818 432 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 FGD3Q5JSP0 725 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 GPR139Q6DWJ6 353 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 SLC25A42Q86VD7 318 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 HPS6Q86YV9 775 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 TCEANCQ8N8B7 351 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 POGLUT1Q8NBL1 392 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 OR4D10Q8NGI6 311 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 TOMM40LQ969M1 308 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 FAM218AQ96MZ4 157 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 BTBD9Q96Q07 612 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 FEVQ99581 238 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 OVOL2Q9BRP0 275 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 CHCHD5Q9BSY4 110 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 GPR88Q9GZN0 384 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 CTSZQ9UBR2 303 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 ANAPC2Q9UJX6 822 aa3.06□□□□□ -1.92
SCFD1-216ENST00000555550 ELF5Q9UKW6 265 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-216ENST00000555550 TRBC2A0A5B9 178 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 CCL24O00175 119 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 SLC1A7O00341 560 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 TADA2AO75478 443 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 CSN3P07498 182 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 MYL6BP14649 208 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 EPCAMP16422 314 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 CYP11B2P19099 503 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 AOC1P19801 751 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 PIK3R1P27986 724 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 CAPZA2P47755 286 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 CLCN4P51793 760 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 ALCAMQ13740 583 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 CFAP58Q5T655 872 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 ZNF841Q6ZN19 808 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 OR4N5Q8IXE1 308 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 GPC2Q8N158 579 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 ZPLD1Q8TCW7 415 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 ZNF597Q96LX8 424 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 CDCA3Q99618 268 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-216ENST00000555550 ZNF577Q9BSK1 485 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 TUBB1Q9H4B7 451 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 RNF121Q9H920 327 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 GNB4Q9HAV0 340 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 NLGN3Q9NZ94 848 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 HACD3Q9P035 362 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
SCFD1-216ENST00000555550 ATRXP46100 2492 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 IGHV4-30-2A0A087WSY4 118 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 TRAV24A0A0B4J272 114 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 A0A1W2PPK0 400 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 SHISA9B4DS77 424 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 NPIPB9F8W1W9 429 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 K7EQD1 137 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 PTGESO14684 152 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 AP5Z1O43299 807 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 GSRP00390 522 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 HOXD4P09016 255 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-216ENST00000555550 CDC25CP30307 473 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 MC5RP33032 325 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 SFTPDP35247 375 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 ILF2Q12905 390 aaKnown RBP3.04□□□□□ -1.92
SCFD1-216ENST00000555550 ALDH1L2Q3SY69 923 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 C9orf152Q5JTZ5 239 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 ARMC4Q5T2S8 1044 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 CYB5D1Q6P9G0 228 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 Q6ZR54 194 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 TLK2Q86UE8 772 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 RCOR2Q8IZ40 523 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 OR52B6Q8NGF0 335 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 OR4C15Q8NGM1 316 aa3.04□□□□□ -1.92
SCFD1-216ENST00000555550 CHURC1Q8WUH1 139 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms