RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SLC24A4Q8NFF2 622 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 OR52K2Q8NGK3 314 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 ARHGAP45Q92619 1136 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 APBB2Q92870 758 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 FAM46BQ96A09 425 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 TUBGCP3Q96CW5 907 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 FBXO17Q96EF6 278 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 STAMBPL1Q96FJ0 436 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 CFAP53Q96M91 514 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 SFXN2Q96NB2 322 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 MOV10L1Q9BXT6 1211 aaKnown RBP4.93□□□□□ -1.62
VRK1-203ENST00000555067 PPP1R3EQ9H7J1 279 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 ZNF334Q9HCZ1 680 aaPredicted RBP4.93□□□□□ -1.62
VRK1-203ENST00000555067 DPP3Q9NY33 737 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 COX16Q9P0S2 106 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 UBQLN2Q9UHD9 624 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 PTBP2Q9UKA9 531 aaKnown RBP4.93□□□□□ -1.62
VRK1-203ENST00000555067 TSPAN16Q9UKR8 245 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 GPR132Q9UNW8 380 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 GAB2Q9UQC2 676 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 TCF19Q9Y242 345 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 ASB3Q9Y575 518 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 UBE4BO95155 1302 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 CGNL1Q0VF96 1302 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 HEG1Q9ULI3 1381 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 A0A1W2PPW3 197 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 TMEM189-UBE2V1I3L0A0 370 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 TO15178 435 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 NDUFS7O75251 213 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 SCGB2A1O75556 95 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 SPAG6O75602 509 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 HNRNPH1P31943 449 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 STX2P32856 288 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 EIF2S3P41091 472 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 VEGFCP49767 419 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 HNRNPFP52597 415 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 MFAP3P55082 362 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 SNRPEP62304 92 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 GBE1Q04446 702 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 UBE2V1Q13404 147 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 MVPQ14764 893 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 EFNB3Q15768 340 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 EIF2S3LQ2VIR3 472 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 FAM174BQ3ZCQ3 159 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 SPOUT1Q5T280 376 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 GGNBP1Q5YKI7 109 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 METTL2BQ6P1Q9 378 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 SLC36A4Q6YBV0 504 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 C15orf52Q6ZUT6 534 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 NRARPQ7Z6K4 114 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 TAF8Q7Z7C8 310 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 GPR180Q86V85 440 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 FAM133AQ8N9E0 248 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 OR52M1Q8NGK5 317 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 BRSK1Q8TDC3 778 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 C14orf79Q96F83 325 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 CDKN2AIPNLQ96HQ2 116 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 METTL2AQ96IZ6 378 aaKnown RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 ASCL2Q99929 193 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 ZNF559Q9BR84 538 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 ECT2Q9H8V3 914 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 SEBOXQ9HB31 216 aaPredicted RBP4.92□□□□□ -1.62
VRK1-203ENST00000555067 TM9SF3Q9HD45 589 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 DNAJC4Q9NNZ3 241 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 KCNMB3Q9NPA1 279 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 ZFP57Q9NU63 452 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 RCOR1Q9UKL0 485 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 ACSL5Q9ULC5 683 aa4.92□□□□□ -1.62
VRK1-203ENST00000555067 ZNF587BE7ETH6 402 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 C16orf97H3BN30 126 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 SGK1O00141 431 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 MID1O15344 667 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 SSX5O60225 188 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 GMFGO60234 142 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 PRAF2O60831 178 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 PGK2P07205 417 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 CSN3P07498 182 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 OR2T7P0C7T2 308 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 UGT1A6P19224 532 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 MAOAP21397 527 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 GDI1P31150 447 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 LHX1P48742 406 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 FUT6P51993 359 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 METAP1P53582 386 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 MTCP1P56278 107 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 BRWD1-AS2P59051 145 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 DLK1P80370 383 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 OVGP1Q12889 678 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 NR1D2Q14995 579 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 GLIPR1L2Q4G1C9 344 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 LRRC38Q5VT99 294 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 LCN10Q6JVE6 187 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 PRR27Q6MZM9 219 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 PRSS55Q6UWB4 352 aaPredicted RBP4.91□□□□□ -1.62
VRK1-203ENST00000555067 KLHDC8AQ8IYD2 350 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 APCDD1Q8J025 514 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 KBTBD3Q8NAB2 608 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 OR2T34Q8NGX1 318 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 SPATA22Q8NHS9 363 aa4.91□□□□□ -1.62
VRK1-203ENST00000555067 CCDC51Q96ER9 411 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms