RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ZNF749O43361 778 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 TLX3O43711 291 aaPredicted RBP10.15□□□□□ -0.78
TMEM260-206ENST00000555046 SMIM24O75264 130 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 SUPT3HO75486 399 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 GFAPP14136 432 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 KRT15P19012 456 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 TAC1P20366 129 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 PSMB5P28074 263 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 HPDP32754 393 aaPredicted RBP10.15□□□□□ -0.78
TMEM260-206ENST00000555046 MAGEA12P43365 314 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 PIK3CGP48736 1102 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 ALDH18A1P54886 795 aaKnown RBP10.15□□□□□ -0.78
TMEM260-206ENST00000555046 RPS15P62841 145 aaKnown RBP10.15□□□□□ -0.78
TMEM260-206ENST00000555046 MC1RQ01726 317 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 HIST2H2ACQ16777 129 aaPredicted RBP10.15□□□□□ -0.78
TMEM260-206ENST00000555046 NDUFA9Q16795 377 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 GARNL3Q5VVW2 1013 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 HIST2H2AA3Q6FI13 130 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 ZNF425Q6IV72 752 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 NIPAL1Q6NVV3 410 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 PAQR7Q86WK9 346 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 KLHDC8AQ8IYD2 350 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 KRT78Q8N1N4 520 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 MREGQ8N565 214 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 PDPRQ8NCN5 879 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 TTLQ8NG68 377 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 OR1L3Q8NH93 324 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 KCTD4Q8WVF5 259 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 NKD1Q969G9 470 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 SEC16BQ96JE7 1060 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 AIF1LQ9BQI0 150 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 GPR87Q9BY21 358 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 CD244Q9BZW8 370 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 SEMA4CQ9C0C4 833 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 PELI2Q9HAT8 420 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 DNAJC11Q9NVH1 559 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.15□□□□□ -0.78
TMEM260-206ENST00000555046 CDC14AQ9UNH5 594 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 SLC22A14Q9Y267 594 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 V9GYY5 206 aaPredicted RBP10.15□□□□□ -0.78
TMEM260-206ENST00000555046 CENPEQ02224 2701 aa10.15□□□□□ -0.78
TMEM260-206ENST00000555046 MYLKQ15746 1914 aa10.15□□□□□ -0.79
TMEM260-206ENST00000555046 DNHD1Q96M86 4753 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 A0A0J9YVX5 310 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 TLDC2A0PJX2 215 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 FITM1A5D6W6 292 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 KRT87PA6NCN2 255 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 URADA6NGE7 173 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 NCF1BA6NI72 391 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 NCF1CA8MVU1 366 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 B8ZZF3 427 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 MEN1O00255 615 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 KATNA1O75449 491 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 WDR47O94967 919 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 DLGAP3O95886 979 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 RECKO95980 971 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 GP1BBP13224 206 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 NCF1P14598 390 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 ALAS2P22557 587 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 GSTM2P28161 218 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 GABRA4P48169 554 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 DCDP81605 110 aaKnown RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 CLN3Q13286 438 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 LAPTM5Q13571 262 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 OR4D1Q15615 310 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 MUM1Q2TAK8 710 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 PAGE2BQ5JRK9 111 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 WASHC2DQ5SRD0 308 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 RHBDD2Q6NTF9 364 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 NXPE4Q6UWF7 544 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 CCDC81Q6ZN84 652 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 MBOAT1Q6ZNC8 495 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 LRRC70Q7Z2Q7 622 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 SPACA3Q8IXA5 215 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 FAM20CQ8IXL6 584 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 CENPLQ8N0S6 344 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 CAMKVQ8NCB2 501 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 GALNT6Q8NCL4 622 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 OR4K1Q8NGD4 311 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 SLC5A11Q8WWX8 675 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 UBE2E3Q969T4 207 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 PTERQ96BW5 349 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 PYCR2Q96C36 320 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 NAF1Q96HR8 494 aaKnown RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF285Q96NJ3 590 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 ATOH8Q96SQ7 321 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 SARGQ9BW04 601 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 SPRTNQ9H040 489 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 MRPL46Q9H2W6 279 aaKnown RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 EPB41L4BQ9H329 900 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 EHD1Q9H4M9 534 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 GPN2Q9H9Y4 310 aaPredicted RBP10.14□□□□□ -0.79
TMEM260-206ENST00000555046 LHX9Q9NQ69 397 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 TBK1Q9UHD2 729 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 IKZF3Q9UKT9 509 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 GRID1Q9ULK0 1009 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 KLHL20Q9Y2M5 609 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 ANGPTL3Q9Y5C1 460 aa10.14□□□□□ -0.79
TMEM260-206ENST00000555046 IGKV1-8A0A0C4DH67 115 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms