RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SF1Q15637 639 aaKnown RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 IMPG1Q17R60 797 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 FAM174BQ3ZCQ3 159 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 RUNDC3AQ59EK9 446 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 MED27Q6P2C8 311 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ZFP1Q6P2D0 407 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ABRAXAS1Q6UWZ7 409 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 CHST15Q7LFX5 561 aaPredicted RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 ZNF551Q7Z340 670 aaPredicted RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 ABI3BPQ7Z7G0 1075 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 C10orf111Q8N326 155 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ANKRD53Q8N9V6 530 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 GOLM1Q8NBJ4 401 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 OR2L8Q8NGY9 312 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 CCDC115Q96NT0 180 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 GUCD1Q96NT3 240 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 MTERF1Q99551 399 aaKnown RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 TRIM4Q9C037 500 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 AICDAQ9GZX7 198 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TRIT1Q9H3H1 467 aaKnown RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 MUC13Q9H3R2 512 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 KLF15Q9UIH9 416 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 NCKAP1Q9Y2A7 1128 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 PABPN1LA6NDY0 278 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 PI15O43692 258 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 HNRNPA2B1P22626 353 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 HTR1EP28566 365 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 RPS13P62277 151 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 BNIP2Q12982 314 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 LAPTM5Q13571 262 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 PDE7AQ13946 482 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 UAP1L1Q3KQV9 507 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 TMEM31Q5JXX7 168 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 HMBOX1Q6NT76 420 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 SYTL1Q8IYJ3 562 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 PAPD5Q8NDF8 572 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 OR8J2Q8NGG1 315 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 SLC26A7Q8TE54 656 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CAMK1GQ96NX5 476 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CGREF1Q99674 301 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CPPED1Q9BRF8 314 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 HAUS8Q9BT25 410 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 KCNH6Q9H252 994 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 KIR3DX1Q9H7L2 352 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 IL1RL2Q9HB29 575 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 ARMC1Q9NVT9 282 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CUEDC1Q9NWM3 386 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 ACTR3BQ9P1U1 418 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 HS3ST3A1Q9Y663 406 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CFAP20Q9Y6A4 193 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 PRAMEF33A0A0G2JMD5 474 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 TOR1BO14657 336 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 TNFRSF10CO14798 259 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 PEX1O43933 1283 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 DFNA5O60443 496 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 C1QCP02747 245 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CDH1P12830 882 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 ACADSP16219 412 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 RPL10P27635 214 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 PSMB5P28074 263 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 MAPK1P28482 360 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CDKN2CP42773 168 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 MRPS22P82650 360 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 RPE65Q16518 533 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 PRSS53Q2L4Q9 553 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 SPIN4Q56A73 249 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 HABP4Q5JVS0 413 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 FAM124AQ86V42 546 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 SYNPOQ8N3V7 929 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 ZNF740Q8NDX6 193 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CLHC1Q8NHS4 586 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 ZNF583Q96ND8 569 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 OR2M4Q96R27 311 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 GAS2L1Q99501 681 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 SARGQ9BW04 601 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 DPY30Q9C005 99 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CHST8Q9H2A9 424 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 ALG2Q9H553 416 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 SYNPO2LQ9H987 977 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 LHX9Q9NQ69 397 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 DNAAF2Q9NVR5 837 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 C6orf203Q9P0P8 240 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 KCNK6Q9Y257 313 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 RUVBL1Q9Y265 456 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 BTBD3Q9Y2F9 522 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 PCDHB3Q9Y5E6 796 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 A0A096LPI6 279 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 KRBA1A5PL33 1030 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 CACNB4O00305 520 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 ARPC2O15144 300 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 SLC31A1O15431 190 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 RPN2P04844 631 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 SLC35G4P0C7Q5 338 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 MTHFD1P11586 935 aaKnown RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 TCN1P20061 433 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 STARD6P59095 220 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 YPEL5P62699 121 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 LIPEQ05469 1076 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 PDSS2Q86YH6 399 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms