RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 KPNA5O15131 536 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 PRPF4O43172 522 aaKnown RBP eCLIP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 MAP3K7O43318 606 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 APOA4P06727 396 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 GSTA1P08263 222 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 LTA4HP09960 611 aaKnown RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 SBK3P0C264 359 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 CBSLP0DN79 551 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 ST6GAL1P15907 406 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 PDHA2P29803 388 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 PRDX3P30048 256 aaKnown RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 OTX2P32243 289 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 CBSP35520 551 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 IL2P60568 153 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 HSPA14Q0VDF9 509 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 CSHL1Q14406 222 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 NCF4Q15080 339 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 NR6A1Q15406 480 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 TTLL9Q3SXZ7 439 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 TBC1D1Q86TI0 1168 aaPredicted RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 RAB43Q86YS6 212 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC22A15Q8IZD6 547 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 TMEM151AQ8N4L1 468 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 NKAPQ8N5F7 415 aaKnown RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 ALKBH8Q96BT7 664 aaKnown RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 PTERQ96BW5 349 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 SNRNP40Q96DI7 357 aaKnown RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 SMAD5Q99717 465 aaKnown RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 OR52A5Q9H2C5 316 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 TMEM216Q9P0N5 145 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC17A7Q9P2U7 560 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 MED13Q9UHV7 2174 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 MYO9AB2RTY4 2548 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 TARM1B6A8C7 271 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 E7EQ34 232 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 BTN3A1O00481 513 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 COPEO14579 308 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ZNF749O43361 778 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ZBTB14O43829 449 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 GLRA3O75311 464 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 CLDN1O95832 211 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ENO3P13929 434 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 PVRP15151 417 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 AGXTP21549 392 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ACADLP28330 430 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 RPA3P35244 121 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 KCNC1P48547 511 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 PLEKHN1Q494U1 663 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 TECRLQ5HYJ1 363 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 NEK10Q6ZWH5 1172 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ISCA2Q86U28 154 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 LCA5Q86VQ0 697 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 CISD2Q8N5K1 135 aaKnown RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 TCP10LQ8TDR4 215 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 DENND1AQ8TEH3 1009 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ASZ1Q8WWH4 475 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 TCTN2Q96GX1 697 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 NRTNQ99748 197 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ASF1BQ9NVP2 202 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 DCDC2Q9UHG0 476 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 TSR3Q9UJK0 312 aaKnown RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ERRFI1Q9UJM3 462 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 RUVBL2Q9Y230 463 aaKnown RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 PADI2Q9Y2J8 665 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 PLLPQ9Y342 182 aa13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 RP1L1Q8IWN7 2480 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-202ENST00000554365 ANKRD12Q6UB98 2062 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 TMEM120BA0PK00 339 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 NPEPPSL1A6NEC2 478 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 ENO4A6NNW6 628 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 CDC7O00311 574 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 IFRD1O00458 451 aaPredicted RBP13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 BTN3A3O00478 584 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 PLIN3O60664 434 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 MATN4O95460 622 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 PROCP04070 461 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 DCTP40126 519 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 ETV4P43268 484 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 GLRBP48167 497 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 RGS4P49798 205 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 SLC18A1P54219 525 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 RPA4Q13156 261 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 ESPL1Q14674 2120 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 OR4D1Q15615 310 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 TSNAXIP1Q2TAA8 658 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 SYTL3Q4VX76 610 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 HSP90B2PQ58FF3 399 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 VWA5B1Q5TIE3 1220 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 MLIPQ5VWP3 458 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 LRRC8EQ6NSJ5 796 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 PHC3Q8NDX5 983 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 DLG3Q92796 817 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 N4BP2L2Q92802 583 aaPredicted RBP13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 KIAA1191Q96A73 305 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 TRAPPC9Q96Q05 1148 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 DPH2Q9BQC3 489 aaPredicted RBP13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 NMRAL1Q9HBL8 299 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 C5AR2Q9P296 337 aa13.44□□□□□ -0.26
SPTLC2-202ENST00000554365 ADAMTS6Q9UKP5 1117 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms