RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CDC42EP4Q9H3Q1 356 aaKnown RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 WDR54Q9H977 334 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 SMYD2Q9NRG4 433 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ABCF3Q9NUQ8 709 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ARL15Q9NXU5 204 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 TXNDC16Q9P2K2 825 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 NXT1Q9UKK6 140 aaKnown RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 MED13Q9UHV7 2174 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 HYKKA2RU49 373 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 ARGFXA6NJG6 315 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 FAM159BA6NKW6 160 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 H0YGG7 62 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 TXNDC9O14530 226 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 ALBP02768 609 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 EIF2S1P05198 315 aaKnown RBP12.47□□□□□ -0.41
SHMT2-211ENST00000554310 PLA2G2AP14555 144 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 SAT1P21673 171 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 STX2P32856 288 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 SLC12A2P55011 1212 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 RRADP55042 308 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 TAS2R39P59534 338 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 ARF3P61204 181 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-211ENST00000554310 POU4F1Q01851 419 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 PRTGQ2VWP7 1150 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 LACTB2Q53H82 288 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CPZQ66K79 652 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CAPN13Q6MZZ7 669 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-211ENST00000554310 PRMT9Q6P2P2 845 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 FBXO42Q6P3S6 717 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 SBSNQ6UWP8 590 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 MBOAT1Q6ZNC8 495 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 MED25Q71SY5 747 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 MRGPREQ86SM8 312 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CCDC25Q86WR0 208 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 C17orf64Q86WR6 236 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CSNK1A1LQ8N752 337 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 TMEM102Q8N9M5 508 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-211ENST00000554310 MVB12AQ96EY5 273 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 OR2A5Q96R48 311 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CPNE1Q99829 537 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 HAUS8Q9BT25 410 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 SGPP1Q9BX95 441 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 ACSS2Q9NR19 701 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 SLC22A11Q9NSA0 550 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 TMEM184CQ9NVA4 438 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CUEDC1Q9NWM3 386 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-211ENST00000554310 PTRH2Q9Y3E5 179 aaKnown RBP12.47□□□□□ -0.41
SHMT2-211ENST00000554310 CCDC88CQ9P219 2028 aa12.47□□□□□ -0.41
SHMT2-211ENST00000554310 BSNQ9UPA5 3926 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 HAT1O14929 419 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 PRPF4O43172 522 aaKnown RBP eCLIP12.46□□□□□ -0.41
SHMT2-211ENST00000554310 CNOT3O75175 753 aaKnown RBP12.46□□□□□ -0.41
SHMT2-211ENST00000554310 IGHEP01854 428 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 SHBGP04278 402 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 OTX2P32243 289 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 GP5P40197 560 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 PGGT1BP53609 377 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 GPX6P59796 221 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 NAB1Q13506 487 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 NAE1Q13564 534 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 ATP1A4Q13733 1029 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 SSPNQ14714 243 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 PPP1R3AQ16821 1122 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 FAM69BQ5VUD6 431 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 GARNL3Q5VVW2 1013 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 TCTN3Q6NUS6 607 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 LCTLQ6UWM7 567 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 TMEM207Q6UWW9 146 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 C3orf62Q6ZUJ4 267 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 COX15Q7KZN9 410 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 OVCH1Q7RTY7 1134 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 ADAMTSL2Q86TH1 951 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 NACC2Q96BF6 587 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 PTERQ96BW5 349 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 FBXL8Q96CD0 374 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 TSPAN17Q96FV3 270 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 C10orf90Q96M02 699 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 RBBP8Q99708 897 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 TRIM55Q9BYV6 548 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 ATG10Q9H0Y0 220 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 ING2Q9H160 280 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 STMN4Q9H169 189 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-211ENST00000554310 GPAMQ9HCL2 828 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 TLK1Q9UKI8 766 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 RUVBL1Q9Y265 456 aaKnown RBP12.46□□□□□ -0.41
SHMT2-211ENST00000554310 TP53TG5Q9Y2B4 290 aa12.46□□□□□ -0.41
SHMT2-211ENST00000554310 PCDHGA9Q9Y5G4 932 aaKnown RBP12.46□□□□□ -0.41
SHMT2-211ENST00000554310 KCNE1BA0A087WTH5 132 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 NPEPPSL1A6NEC2 478 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 CXorf49A8MYA2 514 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-211ENST00000554310 H7BY64 318 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 SLC28A2O43868 658 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 PIAS1O75925 651 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 DNAJB5O75953 348 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 C1QAP02745 245 aa12.45□□□□□ -0.42
SHMT2-211ENST00000554310 ABHD2P08910 425 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms