RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 TRBC2A0A5B9 178 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 C9J4A7 227 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 TAPBPO15533 448 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 KLK8O60259 260 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 ALBP02768 609 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 ITGB2P05107 769 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 ALAS2P22557 587 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 GSTM2P28161 218 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 GCAP28676 217 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 PTPN4P29074 926 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 AHRP35869 848 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 ALDH18A1P54886 795 aaKnown RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 VSNL1P62760 191 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 PCDH1Q08174 1060 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 CDC16Q13042 620 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 DNASE1L3Q13609 305 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 PWP1Q13610 501 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 NDUFA9Q16795 377 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 ERCC6LQ2NKX8 1250 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 ARHGAP40Q5TG30 622 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 FRMPD2BQ6IN97 320 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 NIPAL1Q6NVV3 410 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 C19orf48Q6RUI8 117 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 SYVN1Q86TM6 617 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 VASH2Q86V25 355 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 GSPT2Q8IYD1 628 aaKnown RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 MFSD9Q8NBP5 474 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 LSM14AQ8ND56 463 aaKnown RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 AENQ8WTP8 325 aaKnown RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 CT55Q8WUE5 264 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 UBTD2Q8WUN7 234 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 KCTD4Q8WVF5 259 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 UBLCP1Q8WVY7 318 aaPredicted RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 CAVIN3Q969G5 261 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 NEIL2Q969S2 332 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 NACC2Q96BF6 587 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 TM4SF19Q96DZ7 209 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 WBP1Q96G27 269 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 MRPL57Q9BQC6 102 aaKnown RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 AIF1LQ9BQI0 150 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 PARD6BQ9BYG5 372 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 CD244Q9BZW8 370 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 CHST8Q9H2A9 424 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 NT5DC2Q9H857 520 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 AKIRIN1Q9H9L7 192 aaPredicted RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 CPNE5Q9HCH3 593 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 DNAJC11Q9NVH1 559 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 WWOXQ9NZC7 414 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 RAB21Q9UL25 225 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 PADI2Q9Y2J8 665 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 PCDHGA4Q9Y5G9 962 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 SNRNP200O75643 2136 aaKnown RBP8.92□□□□□ -0.98
CHD8-206ENST00000553870 SPTBP11277 2137 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 ANKRD12Q6UB98 2062 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 HEATR5BQ9P2D3 2071 aa8.92□□□□□ -0.98
CHD8-206ENST00000553870 USP24Q9UPU5 2620 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 PTPRQQ9UMZ3 2332 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 NCF1BA6NI72 391 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 NCF1CA8MVU1 366 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 SUPT3HB4E1H0 165 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 HAT1O14929 419 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 CLGNO14967 610 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 PRPF4O43172 522 aaKnown RBP eCLIP8.91□□□□□ -0.98
CHD8-206ENST00000553870 CDH16O75309 829 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 KATNA1O75449 491 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 SUPT3HO75486 399 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 CREG1O75629 220 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 RFPL1O75677 317 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 WDR47O94967 919 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 EIF2S1P05198 315 aaKnown RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 CAPN1P07384 714 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 NUDT17P0C025 328 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 C1GALT1C1LP0DN25 315 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 CDH1P12830 882 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 MTHFD2P13995 350 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 NCF1P14598 390 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 HSD17B3P37058 310 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 CASP2P42575 452 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 SCTRP47872 440 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 IRF9Q00978 393 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 LAPTM5Q13571 262 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 E2F2Q14209 437 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 NCF4Q15080 339 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 PCBP2Q15366 365 aaKnown RBP eCLIP8.91□□□□□ -0.98
CHD8-206ENST00000553870 TBCCQ15814 346 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 NKAIN1Q4KMZ8 207 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 ATG9BQ674R7 924 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 TTLL10Q6ZVT0 673 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 LRRC70Q7Z2Q7 622 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 ASPGQ86U10 573 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 KRT78Q8N1N4 520 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 RIBC1Q8N443 379 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 MREGQ8N565 214 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 CSNK1A1LQ8N752 337 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 TRPV3Q8NET8 790 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 TTLQ8NG68 377 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 SLC13A3Q8WWT9 602 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 FKBP10Q96AY3 582 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 WDR34Q96EX3 536 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms