RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SCAMP2O15127 329 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 CCL16O15467 120 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 HS6ST1O60243 411 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 KCNK5O95279 499 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 SEMG1P04279 462 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 COX7A2P14406 83 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ITIH1P19827 911 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 CCNA2P20248 432 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 DNAJA1P31689 397 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 RPL3P39023 403 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 CDKN2CP42773 168 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 EMP3P54852 163 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 DOC2AQ14183 400 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 TEAD4Q15561 434 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 NEDD8Q15843 81 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 GALNT18Q6P9A2 607 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 EIF3MQ7L2H7 374 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 R3HCC1LQ7Z5L2 792 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ANKRD46Q86W74 232 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 PIK3C3Q8NEB9 887 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ITFG2Q969R8 447 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 EGLN2Q96KS0 407 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 MRGPRX3Q96LB0 322 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 RIOK2Q9BVS4 552 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 LMAN2LQ9H0V9 348 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 SMG9Q9H0W8 520 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ATG10Q9H0Y0 220 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ABCG8Q9H221 673 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 SMURF2Q9HAU4 748 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 PALMDQ9NP74 551 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 MBD1Q9UIS9 605 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 MAGED1Q9Y5V3 778 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 SNX5Q9Y5X3 404 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 KCNE2Q9Y6J6 123 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF197O14709 1029 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 FKBP9O95302 570 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 FABP3P05413 133 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 GSNP06396 782 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 HNRNPA1P09651 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ENGP17813 658 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 FPR1P21462 350 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 IGFBP4P22692 258 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 IGFBP5P24593 272 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 KDELR2P33947 212 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 HPCAL1P37235 193 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 MMP12P39900 470 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ETV3P41162 512 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 WNT3P56703 355 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ELOAQ14241 798 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 TEAD2Q15562 447 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 LY6G5CQ5SRR4 150 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 XAF1Q6GPH4 301 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 CBLL1Q75N03 491 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 Q7L0L9 218 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF765Q7L2R6 523 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ZZZ3Q8IYH5 903 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 SPARTQ8N0X7 666 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 MRPL43Q8N983 215 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 FAM81AQ8TBF8 368 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 MRPL38Q96DV4 380 aaKnown RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 WDR34Q96EX3 536 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 FAM210AQ96ND0 272 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 DUSP26Q9BV47 211 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 EHD1Q9H4M9 534 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF282Q9UDV7 671 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 TMEFF2Q9UIK5 374 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 FAF1Q9UNN5 650 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-205ENST00000553474 DOCK6Q96HP0 2047 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 FADS2P1A8MWK0 482 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 E7EQ34 232 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 FOXE1O00358 373 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 RNASET2O00584 256 aaKnown RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 NRG2O14511 850 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 TSPAN6O43657 245 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 NOBOXO60393 691 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 MOSPD3O75425 235 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 ATE1O95260 518 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 MYCLP1P12525 358 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 CD22P20273 847 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 PIGAP37287 484 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 IST1P53990 364 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 CTBSQ01459 385 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 CD47Q08722 323 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 TMEM115Q12893 351 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF829Q3KNS6 432 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 BCL7AQ4VC05 210 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 CPTPQ5TA50 214 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 TMEM215Q68D42 235 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 KDM4DQ6B0I6 523 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 CAPN13Q6MZZ7 669 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 ZCCHC8Q6NZY4 707 aaKnown RBP12.47□□□□□ -0.41
SHMT2-205ENST00000553474 LIPIQ6XZB0 460 aa12.47□□□□□ -0.41
SHMT2-205ENST00000553474 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms