RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 ANKRD12Q6UB98 2062 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.2□□□□□ -1.268e-8■■■■□ 23.6
LETMD1-225ENST00000550715 NKX2-6A6NCS4 301 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 LILRA5A6NI73 299 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 H7C1Q1 480 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 M0QYV0 167 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 PEX12O00623 359 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 SNX2O60749 519 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 SRGAP2O75044 1071 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 SUN1O94901 812 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 STAT6P42226 847 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 GSDMDP57764 484 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 CCZ1BP86790 482 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 CCZ1P86791 482 aaPredicted RBP7.2□□□□□ -1.26
LETMD1-225ENST00000550715 CDK3Q00526 305 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 TFF3Q07654 80 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 LRMPQ12912 555 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 TRIM14Q14142 442 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 ACOX1Q15067 660 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 PTCHD3Q3KNS1 767 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 AGAP7PQ5VUJ5 663 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 C3P1Q6ZMU1 363 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 CAMKMTQ7Z624 323 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 TECPR1Q7Z6L1 1165 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 TMEM126BQ8IUX1 230 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 CCDC150Q8NCX0 1101 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 RSC1A1Q92681 617 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 SMARCE1Q969G3 411 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 DHX58Q96C10 678 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 LRRC46Q96FV0 321 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 PAGE5Q96GU1 130 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 CCDC34Q96HJ3 373 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 GDAP1L1Q96MZ0 367 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 LRFN5Q96NI6 719 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 AGAP4Q96P64 663 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 PLEKHG4BQ96PX9 1271 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 GSDMAQ96QA5 445 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 MED15Q96RN5 788 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 MYO1AQ9UBC5 1043 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 LRCH1Q9Y2L9 728 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 ZNF835Q9Y2P0 537 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 ARID1AO14497 2285 aa7.2□□□□□ -1.26
LETMD1-225ENST00000550715 DOCK4Q8N1I0 1966 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 IGLV3-10A0A075B6K4 115 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 TSPAN11A1L157 253 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 RAB27BO00194 218 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 IFRD1O00458 451 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 ADAM10O14672 748 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 SMC2O95347 1197 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 LCA5LO95447 670 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 HOXD4P09016 255 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 ELFN1P0C7U0 828 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 UNGP13051 313 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 UGT1A4P22310 534 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 RORAP35398 523 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 GPD2P43304 727 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 HSPA7P48741 367 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 RBPJQ06330 500 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 RAD51Q06609 339 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 CUL4BQ13620 913 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 NCF4Q15080 339 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 MPEG1Q2M385 716 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 CD300EQ496F6 205 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 PLA1AQ53H76 456 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 IRGCQ6NXR0 463 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 LINC00696Q6ZRV3 163 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 TMEM26Q6ZUK4 368 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 RNF44Q7L0R7 432 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 PHLDB2Q86SQ0 1253 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 TRIM74Q86UV6 250 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 CAMK1DQ8IU85 385 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 LRRC8AQ8IWT6 810 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 C17orf53Q8N3J3 647 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 PDILTQ8N807 584 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 HCAR2Q8TDS4 363 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 ZNF566Q969W8 418 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 ZNF501Q96CX3 271 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 RMND5BQ96G75 393 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 ZNF514Q96K75 400 aaPredicted RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 COQ10AQ96MF6 247 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 IP6K3Q96PC2 410 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 GPATCH1Q9BRR8 931 aaKnown RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 XPO4Q9C0E2 1151 aaKnown RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 WDR12Q9GZL7 423 aaKnown RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 THAP9Q9H5L6 903 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 STN1Q9H668 368 aaKnown RBP7.19□□□□□ -1.26
LETMD1-225ENST00000550715 PPCSQ9HAB8 311 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 IFNKQ9P0W0 207 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 SEMA5BQ9P283 1151 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 KIAA1257Q9ULG3 409 aa7.19□□□□□ -1.26
LETMD1-225ENST00000550715 SOCS6O14544 535 aa7.18□□□□□ -1.26
LETMD1-225ENST00000550715 PRAMEF2O60811 474 aa7.18□□□□□ -1.26
LETMD1-225ENST00000550715 GRAP2O75791 330 aa7.18□□□□□ -1.26
LETMD1-225ENST00000550715 TMCC1O94876 653 aa7.18□□□□□ -1.26
LETMD1-225ENST00000550715 TOXO94900 526 aa7.18□□□□□ -1.26
LETMD1-225ENST00000550715 ATP1A3P13637 1013 aa7.18□□□□□ -1.26
LETMD1-225ENST00000550715 CASP1P29466 404 aa7.18□□□□□ -1.26
LETMD1-225ENST00000550715 ITGA8P53708 1063 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms