RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 SELENOMQ8WWX9 145 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 KCNA7Q96RP8 456 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 ELAC2Q9BQ52 826 aaKnown RBP15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 LRRN3Q9H3W5 708 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 PRM3Q9NNZ6 103 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 RXFP3Q9NSD7 469 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 RIC8BQ9NVN3 520 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 NMRK1Q9NWW6 199 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 HEATR5BQ9P2D3 2071 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 IGKV1-8A0A0C4DH67 115 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 ANKDD1BA6NHY2 528 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 SLC28A1O00337 649 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 SH3BP5O60239 455 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 RPLP0P05388 317 aaKnown RBP15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 AHRP35869 848 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 AQP5P55064 265 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 INHBCP55103 352 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 CSTF3Q12996 717 aaKnown RBP15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 ILKQ13418 452 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 RBBP5Q15291 538 aaKnown RBP15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 PDCD2Q16342 344 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 STPG1Q5TH74 334 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 NKAIN2Q5VXU1 208 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 TMEM71Q6P5X7 295 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 ACAD11Q709F0 780 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 PAQR7Q86WK9 346 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 KMT5CQ86Y97 462 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 BAHD1Q8TBE0 780 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 BCAS4Q8TDM0 211 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 USP7Q93009 1102 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 C19orf60Q96EN9 201 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 TCTN2Q96GX1 697 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 TGM7Q96PF1 710 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 CHRNA10Q9GZZ6 450 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 MEAF6Q9HAF1 191 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 BRF2Q9HAW0 419 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 ZNF490Q9ULM2 529 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 PPT2Q9UMR5 302 aa15.2■□□□□ 0.02
TRAFD1-203ENST00000547063 A0A0G2JND7 137 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 FOXE1O00358 373 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 NDUFAB1O14561 156 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 RGS14O43566 566 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 OR1F1O43749 312 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 SNX3O60493 162 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 SKAP2O75563 359 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 RASSF9O75901 435 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 ZBTB11O95625 1053 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 PCNAP12004 261 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 SERPINB3P29508 390 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 SCTRP47872 440 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 ARFIP2P53365 341 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 LIMK1P53667 647 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 YBX1P67809 324 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 MEF2AQ02078 507 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 BTKQ06187 659 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 IMPG1Q17R60 797 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 ZC3H12BQ5HYM0 836 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 EPGNQ6UW88 154 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 TRIM46Q7Z4K8 759 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 PRSS42Q7Z5A4 293 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 TRIM73Q86UV7 250 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 C19orf47Q8N9M1 422 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 TRPV3Q8NET8 790 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 OR4D9Q8NGE8 314 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 WDR20Q8TBZ3 569 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 TRAPPC9Q96Q05 1148 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 GFM1Q96RP9 751 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 MAP3K3Q99759 626 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 ZFYVE21Q9BQ24 234 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 NUF2Q9BZD4 464 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 RHBGQ9H310 441 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 DCTN4Q9UJW0 460 aa15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 ASCC3Q8N3C0 2202 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-203ENST00000547063 RP1P56715 2156 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 ZNF195O14628 629 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 HAT1O14929 419 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 PIP5K1BO14986 540 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 DIAPH2O60879 1101 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 CBFA2T3O75081 653 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 SNRNP200O75643 2136 aaKnown RBP15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 PDYNP01213 254 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 CDK4P11802 303 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 ARL4DP49703 201 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 GFERP55789 205 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 PPP1CAP62136 330 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 CCL7P80098 99 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 E2F1Q01094 437 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 NHLH1Q02575 133 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 ABRAXAS2Q15018 415 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 SGO1Q5FBB7 561 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 CACHD1Q5VU97 1274 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 CGB2Q6NT52 195 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 FAM92BQ6ZTR7 304 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 USP53Q70EK8 1073 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 PIGWQ7Z7B1 504 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 FAM20CQ8IXL6 584 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 ZNF655Q8N720 491 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 ANKS4BQ8N8V4 417 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 MFSD9Q8NBP5 474 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms