RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 HDDC2Q7Z4H3 204 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF276Q8N554 614 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TMIGD2Q96BF3 282 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ZBED6CLQ96FA7 236 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TGM7Q96PF1 710 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CCM2Q9BSQ5 444 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TOR3AQ9H497 397 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NOL11Q9H8H0 719 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NUDT4Q9NZJ9 180 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 B4GALT6Q9UBX8 382 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SIT1Q9Y3P8 196 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 A0A1W2PPW3 197 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NPC1O15118 1278 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SLC7A4O43246 635 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TMEM63AO94886 807 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CLUP10909 449 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CHRNA6Q15825 494 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 FBXO48Q5FWF7 155 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 LIPMQ5VYY2 423 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 RASSF6Q6ZTQ3 369 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 HPS6Q86YV9 775 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 PLXDC1Q8IUK5 500 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 OR5T3Q8NGG3 340 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 HHIPQ96QV1 700 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CPEB1Q9BZB8 566 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 KCNH6Q9H252 994 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CSNK1G1Q9HCP0 422 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TAC3Q9UHF0 121 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TRAF6Q9Y4K3 522 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TRIP11Q15643 1979 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 A0A1W2PPM1 405 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 PTGES3LE9PB15 166 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CDC7O00311 574 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TP53I11O14683 189 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SNPHO15079 494 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NDUFS4O43181 175 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 UGT2B17O75795 530 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 STC2O76061 302 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TFAP2AP05549 437 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF823P16415 610 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 C4BPBP20851 252 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NKX3-2P78367 333 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ARHGAP8P85298 464 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 E2F2Q14209 437 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TCEAL1Q15170 157 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 HKDC1Q2TB90 917 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 C12orf40Q86WS4 652 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 GRAMD2AQ8IUY3 354 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TCEAL8Q8IYN2 117 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SPERTQ8NA61 448 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SLC13A3Q8WWT9 602 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 MMABQ96EY8 250 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF717Q9BY31 904 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 HDHD2Q9H0R4 259 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 RC3H2Q9HBD1 1191 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ZCCHC3Q9NUD5 404 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 PTGFRNQ9P2B2 879 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TPRKBQ9Y3C4 175 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CLOCKO15516 846 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TSC22D2O75157 780 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TULP3O75386 442 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 LEFTY1O75610 366 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SNX4O95219 450 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CLDN7O95471 211 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 FUCA1P04066 466 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 OTX2P32243 289 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NR4A2P43354 598 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 FOXK1P85037 733 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SPIBQ01892 262 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CD300CQ08708 224 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TLR1Q15399 786 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NUDT13Q86X67 352 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 LNX2Q8N448 690 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 AADATQ8N5Z0 425 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 TERB1Q8NA31 727 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CCDC54Q8NEL0 328 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 OR7G1Q8NGA0 311 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SPPL3Q8TCT6 385 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 CLCC1Q96S66 551 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 MTERF1Q99551 399 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SLX1AQ9BQ83 275 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SLC2A11Q9BYW1 496 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 GRHL1Q9NZI5 618 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 EIF2B4Q9UI10 523 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 GSTK1Q9Y2Q3 226 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 RAP2CQ9Y3L5 183 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SAMHD1Q9Y3Z3 626 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 MAP4K5Q9Y4K4 846 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 PCDHGB5Q9Y5G0 923 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SCN10AQ9Y5Y9 1956 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 A0A1W2PQ72 361 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CIB4A0PJX0 185 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CDC40O60508 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 PEX14O75381 377 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 IFI30P13284 250 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TSHRP16473 764 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 HK2P52789 917 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CTBP2P56545 445 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 RAB15P59190 212 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms