RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 FMO2Q99518 471 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 SLC26A1Q9H2B4 701 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 ZNF71Q9NQZ8 489 aaPredicted RBP14.99□□□□□ -0.01
CCDC78-216ENST00000544996 ZNF282Q9UDV7 671 aaPredicted RBP14.99□□□□□ -0.01
CCDC78-216ENST00000544996 G3BP2Q9UN86 482 aaKnown RBP14.99□□□□□ -0.01
CCDC78-216ENST00000544996 SPTBP11277 2137 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 CNOT3O75175 753 aaKnown RBP14.98□□□□□ -0.01
CCDC78-216ENST00000544996 FAM155BO75949 473 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 DNAJB5O75953 348 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 WISP3O95389 354 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-216ENST00000544996 FBLP22087 321 aaKnown RBP14.98□□□□□ -0.01
CCDC78-216ENST00000544996 CRABP2P29373 138 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 CCL11P51671 97 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 ATP1A4Q13733 1029 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 CSHL1Q14406 222 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 SLMAPQ14BN4 828 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 ZKSCAN8Q15776 578 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-216ENST00000544996 NKG7Q16617 165 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 ZXDCQ2QGD7 858 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-216ENST00000544996 LACTB2Q53H82 288 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-216ENST00000544996 TCTN3Q6NUS6 607 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 COX15Q7KZN9 410 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 MRGPREQ86SM8 312 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 SPATA6LQ8N4H0 392 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 ABHD11Q8NFV4 315 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 FER1L6-AS2Q96M78 137 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 DRC3Q9H069 523 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 CTSFQ9UBX1 484 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 SH2B3Q9UQQ2 575 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 DYRK1BQ9Y463 629 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 KCNE2Q9Y6J6 123 aa14.98□□□□□ -0.01
CCDC78-216ENST00000544996 SNRNP200O75643 2136 aaKnown RBP14.98□□□□□ -0.01
CCDC78-216ENST00000544996 FEZF1A0PJY2 475 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 MED26O95402 600 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 AVPR1BP47901 424 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 CHAF1BQ13112 559 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 DSG2Q14126 1118 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 FAM53BQ14153 422 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 EFTUD2Q15029 972 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC78-216ENST00000544996 TGFBIQ15582 683 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 CPZQ66K79 652 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 CCDC91Q7Z6B0 441 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 TBC1D1Q86TI0 1168 aaPredicted RBP14.97□□□□□ -0.01
CCDC78-216ENST00000544996 THOC6Q86W42 341 aaKnown RBP14.97□□□□□ -0.01
CCDC78-216ENST00000544996 GPSM1Q86YR5 675 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 DTWD1Q8N5C7 304 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 CAMKVQ8NCB2 501 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 SLC5A11Q8WWX8 675 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 MRRFQ96E11 262 aaKnown RBP14.97□□□□□ -0.01
CCDC78-216ENST00000544996 MMABQ96EY8 250 aaPredicted RBP14.97□□□□□ -0.01
CCDC78-216ENST00000544996 VPS50Q96JG6 964 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 OR4K3Q96R72 315 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 YIPF2Q9BWQ6 316 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 TRIM55Q9BYV6 548 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 UNKQ9C0B0 810 aaKnown RBP14.97□□□□□ -0.01
CCDC78-216ENST00000544996 SYNPO2LQ9H987 977 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 NINJ2Q9NZG7 142 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 SLC22A14Q9Y267 594 aa14.97□□□□□ -0.01
CCDC78-216ENST00000544996 SMG1Q96Q15 3661 aaKnown RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 NCF1BA6NI72 391 aaPredicted RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 VSTM2BA6NLU5 285 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 NCF1CA8MVU1 366 aaPredicted RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 P2RX6O15547 441 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 OR1F1O43749 312 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 UMODP07911 640 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 SLC35G6P0C7Q6 338 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 NCF1P14598 390 aaPredicted RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 CD1DP15813 335 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 MMP11P24347 488 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 BCL6P41182 706 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 UAP1Q16222 522 aaPredicted RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 CDKL4Q5MAI5 379 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 SHISA6Q6ZSJ9 500 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 PRICKLE2Q7Z3G6 844 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 VN1R4Q7Z5H5 301 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 ASPGQ86U10 573 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 PTRH1Q86Y79 214 aaKnown RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 IFT20Q8IY31 132 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 TCAIMQ8N3R3 496 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 MFSD9Q8NBP5 474 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 CLEC1AQ8NC01 280 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 OR4K1Q8NGD4 311 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 STT3BQ8TCJ2 826 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 SLC13A3Q8WWT9 602 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 NEIL2Q969S2 332 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 MIEF2Q96C03 454 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 RHBDF1Q96CC6 855 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 UBXN10Q96LJ8 280 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 TSNARE1Q96NA8 513 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 SPSB2Q99619 263 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 SLC25A23Q9BV35 468 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 SOX17Q9H6I2 414 aaPredicted RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 ACSS3Q9H6R3 686 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 CNOT10Q9H9A5 744 aaKnown RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 SEMA3GQ9NS98 782 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 P4HTMQ9NXG6 502 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 TRPC4Q9UBN4 977 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 TP53TG5Q9Y2B4 290 aa14.96□□□□□ -0.01
CCDC78-216ENST00000544996 PCDHGA9Q9Y5G4 932 aaKnown RBP14.96□□□□□ -0.01
CCDC78-216ENST00000544996 PIEZO2Q9H5I5 2752 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms