RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CHIT1Q13231 466 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 SLBPQ14493 270 aaKnown RBP eCLIP13.04□□□□□ -0.32
SP140-213ENST00000543928 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.04□□□□□ -0.32
SP140-213ENST00000543928 XKR6Q5GH73 641 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 PRAMEF9Q5VWM5 478 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 PWWP2BQ6NUJ5 590 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 RPS27LQ71UM5 84 aaKnown RBP13.04□□□□□ -0.32
SP140-213ENST00000543928 GPR135Q8IZ08 494 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 OR4N4Q8N0Y3 316 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 ZNF740Q8NDX6 193 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 ZNF483Q8TF39 744 aaPredicted RBP13.04□□□□□ -0.32
SP140-213ENST00000543928 GATA6Q92908 595 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 RNF31Q96EP0 1072 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 NSUN5Q96P11 429 aaKnown RBP13.04□□□□□ -0.32
SP140-213ENST00000543928 TMEM237Q96Q45 408 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 TEFMQ96QE5 360 aaKnown RBP13.04□□□□□ -0.32
SP140-213ENST00000543928 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 AIF1LQ9BQI0 150 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 C1QTNF3Q9BXJ4 246 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 ERVK-6Q9BXR3 956 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 B3GNT4Q9C0J1 378 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 SPRTNQ9H040 489 aaPredicted RBP13.04□□□□□ -0.32
SP140-213ENST00000543928 EHD1Q9H4M9 534 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 IPPKQ9H8X2 491 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 SYNPO2LQ9H987 977 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 ACSS2Q9NR19 701 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 ZNF446Q9NWS9 450 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 GEMIN8Q9NWZ8 242 aaKnown RBP13.04□□□□□ -0.32
SP140-213ENST00000543928 PCDHGA7Q9Y5G6 932 aa13.04□□□□□ -0.32
SP140-213ENST00000543928 MDC1Q14676 2089 aaKnown RBP13.04□□□□□ -0.32
SP140-213ENST00000543928 TRBC2A0A5B9 178 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 H0YGG7 62 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 PRPF4O43172 522 aaKnown RBP eCLIP13.03□□□□□ -0.32
SP140-213ENST00000543928 OR1F1O43749 312 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 LCMT2O60294 686 aaKnown RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 SRPX2O60687 465 aaPredicted RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 H2AFYO75367 372 aaKnown RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 KATNA1O75449 491 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 SUPT7LO94864 414 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 IMPDH1P20839 514 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 CXCR2P25025 360 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 BCL6P41182 706 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 CDH13P55290 713 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 ARF3P61204 181 aaPredicted RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 DOC2AQ14183 400 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 PCLAFQ15004 111 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 TBCCQ15814 346 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 UNC50Q53HI1 259 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 TCTE1Q5JU00 501 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 WASHC2DQ5SRD0 308 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 ZNF678Q5SXM1 525 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 PRAMEF17Q5VTA0 474 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 TMEM126BQ8IUX1 230 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 C10orf107Q8IVU9 208 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 TBC1D19Q8N5T2 526 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 GOLGA6L1Q8N7Z2 621 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 MFSD9Q8NBP5 474 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 MDM1Q8TC05 714 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 PPP4R1Q8TF05 950 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 RERGQ96A58 199 aaPredicted RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 L3HYPDHQ96EM0 354 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 MOCOSQ96EN8 888 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 WDR34Q96EX3 536 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 ZNF285Q96NJ3 590 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 SH3GL2Q99962 352 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 SARGQ9BW04 601 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 NOL11Q9H8H0 719 aaKnown RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 ZBTB26Q9HCK0 441 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 SEMA4BQ9NPR2 832 aaPredicted RBP13.03□□□□□ -0.32
SP140-213ENST00000543928 THSD1Q9NS62 852 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 STARD5Q9NSY2 213 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 OXSMQ9NWU1 459 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
SP140-213ENST00000543928 AHCTF1Q8WYP5 2266 aa13.02□□□□□ -0.32
SP140-213ENST00000543928 KCNE1BA0A087WTH5 132 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 H3BMH7 237 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 OR7A17O14581 309 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 TM9SF1O15321 606 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ZSCAN9O15535 394 aaPredicted RBP13.02□□□□□ -0.33
SP140-213ENST00000543928 SCRG1O75711 98 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 WFS1O76024 890 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 KIAA0754O94854 1291 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ZWINTO95229 277 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 STATHP02808 62 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ZNF28P17035 718 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 TSPAN8P19075 237 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 CD22P20273 847 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ARL1P40616 181 aaPredicted RBP13.02□□□□□ -0.33
SP140-213ENST00000543928 CASP2P42575 452 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ETV4P43268 484 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 SCTRP47872 440 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 CCNG1P51959 295 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 DNAJB13P59910 316 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 ERVPABLB-1P60509 514 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 PCDH1Q08174 1060 aa13.02□□□□□ -0.33
SP140-213ENST00000543928 MPP2Q14168 576 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms