RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 CLCA1A8K7I4 914 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 NT5C1B-RDH14C9J2C7 533 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 SCN2BO60939 215 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 MED26O95402 600 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 NUDT7P0C024 238 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 SPAM1P38567 509 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 CASP3P42574 277 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 AP1S1P61966 158 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 KCNJ10P78508 379 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 PRKCDQ05655 676 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 BCL2L1Q07817 233 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 BOP1Q14137 746 aaKnown RBP12.51□□□□□ -0.41
DDX11-223ENST00000542838 PTCHD3Q3KNS1 767 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 ZSWIM9Q86XI8 627 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 SYNPOQ8N3V7 929 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 DNAJC22Q8N4W6 341 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 TTPALQ9BTX7 342 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 NXF2Q9GZY0 626 aaKnown RBP12.51□□□□□ -0.41
DDX11-223ENST00000542838 TPT1P8Q9HAU6 139 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 PLCXD1Q9NUJ7 323 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 PCDHGB3Q9Y5G1 929 aa12.51□□□□□ -0.41
DDX11-223ENST00000542838 SCN8AQ9UQD0 1980 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 HAT1O14929 419 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 SUV39H1O43463 412 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 TLL1O43897 1013 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 STSP08842 583 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 CBSLP0DN79 551 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 CBSP35520 551 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 IDH2P48735 452 aaKnown RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 ZXDBP98169 803 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 SEMG2Q02383 582 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 VEZF1Q14119 521 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 FRG2Q64ET8 278 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 CCBE1Q6UXH8 406 aaPredicted RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 CCDC80Q76M96 950 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 STX19Q8N4C7 294 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 L3MBTL4Q8NA19 623 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 ATL1Q8WXF7 558 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 FRG2BQ96QU4 278 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 FEVQ99581 238 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 RAD18Q9NS91 495 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 ADPRHL2Q9NX46 363 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 QPCTLQ9NXS2 382 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 FZD4Q9ULV1 537 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 SLC22A14Q9Y267 594 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 HIST1H2AGP0C0S8 130 aaPredicted RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 HIST1H2ADP20671 130 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 TCEA1P23193 301 aaKnown RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 CCR7P32248 378 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 CYP4F2P78329 520 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 SMARCB1Q12824 385 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 GPR33Q49SQ1 333 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 ARMCX4Q5H9R4 360 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 TTC23LQ6PF05 361 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 PRSS55Q6UWB4 352 aaPredicted RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 ANKS3Q6ZW76 656 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 FAM124AQ86V42 546 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 SPPL2AQ8TCT8 520 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 BHMTQ93088 406 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 ZNF486Q96H40 463 aaPredicted RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 HIST1H2AHQ96KK5 128 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 HIST1H2AJQ99878 128 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 CHCHD6Q9BRQ6 235 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 H2AFJQ9BTM1 129 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 MOV10Q9HCE1 1003 aaKnown RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 GPR83Q9NYM4 423 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 CCDC59Q9P031 241 aaKnown RBP12.5□□□□□ -0.41
DDX11-223ENST00000542838 HCSTQ9UBK5 93 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 PCDHB11Q9Y5F2 797 aa12.5□□□□□ -0.41
DDX11-223ENST00000542838 PRAMEF4O60810 478 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 DNTTP04053 509 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 HSMCR30P0CW71 290 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 ITPKAP23677 461 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 AOAHP28039 575 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 CSKP41240 450 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 NSG1P42857 185 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 FKBP1BP68106 108 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 IFITM2Q01629 132 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 HSPA14Q0VDF9 509 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 NDUFA5Q16718 116 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 CDKL4Q5MAI5 379 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 PRAMEF9Q5VWM5 478 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 GPR155Q7Z3F1 870 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 ZNF605Q86T29 641 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 CPA6Q8N4T0 437 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 Q96MT0 163 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 CENPOQ9BU64 300 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 RNF38Q9H0F5 515 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 TMEM184CQ9NVA4 438 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 FAM120CQ9NX05 1096 aaKnown RBP12.49□□□□□ -0.41
DDX11-223ENST00000542838 MARCH5Q9NX47 278 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 PCDHGB6Q9Y5F9 930 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 PCDHGA3Q9Y5H0 932 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 KRT87PA6NCN2 255 aa12.49□□□□□ -0.41
DDX11-223ENST00000542838 FAM47E-STBD1D6RA91 191 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms