RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SEMA4DQ92854 862 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 DAZLQ92904 295 aaKnown RBP3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 SLCO4A1Q96BD0 722 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 DHX58Q96C10 678 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 PYCR2Q96C36 320 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 ZG16BQ96DA0 208 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 LINGO1Q96FE5 620 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 QRFPRQ96P65 431 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 RASL10BQ96S79 203 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 MTERF1Q99551 399 aaKnown RBP3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 ASCL2Q99929 193 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 C17orf62Q9BQA9 187 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 CDK19Q9BWU1 502 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 IDI2Q9BXS1 227 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 TM6SF1Q9BZW5 370 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 TOR3AQ9H497 397 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 PDGFCQ9NRA1 345 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 CENPMQ9NSP4 180 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 RAI14Q9P0K7 980 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 B3GAT1Q9P2W7 334 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 NOCTQ9UK39 431 aaKnown RBP3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 TLK1Q9UKI8 766 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 PLA2G4CQ9UP65 541 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 SPIN1Q9Y657 262 aaPredicted RBP3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 KIF15Q9NS87 1388 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 RGPD1P0DJD0 1748 aa3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 XRN1Q8IZH2 1706 aaKnown RBP3.72□□□□□ -1.81
SFSWAP-211ENST00000542813 CAMTA1Q9Y6Y1 1673 aa3.71□□□□□ -1.81
SFSWAP-211ENST00000542813 PTPRCP08575 1304 aa3.71□□□□□ -1.81
SFSWAP-211ENST00000542813 PTPRUQ92729 1446 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 A0A087X0K7 114 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 A0A0B4J203 849 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 MACROD2A1Z1Q3 448 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 DENND3A2RUS2 1198 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 PRSS46E5RG02 174 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 TMEM178BH3BS89 294 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 DYNC1I1O14576 645 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 GMFGO60234 142 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 GPR137BO60478 399 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ATP6V1G1O75348 118 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 LDLRP01130 860 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 KRT6BP04259 564 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 CPA3P15088 417 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ZNF18P17022 549 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 OR3A1P47881 315 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 KRT6CP48668 564 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 SULT1E1P49888 294 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 RASSF2P50749 326 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 CNN1P51911 297 aaKnown RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 GBX2P52951 348 aaPredicted RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 CLDN15P56746 228 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 COG7P83436 770 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 NHLH1Q02575 133 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 TFF2Q03403 129 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ZNF91Q05481 1191 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 SLC34A1Q06495 639 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 EZH2Q15910 746 aaKnown RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 PRAMEF7Q5VXH5 474 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 PM20D1Q6GTS8 502 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 PCSK4Q6UW60 755 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ZNF627Q7L945 461 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 MAP7D3Q8IWC1 876 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 CHERPQ8IWX8 916 aaKnown RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 OR56B1Q8NGI3 324 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 SLC38A5Q8WUX1 472 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 THOC1Q96FV9 657 aaKnown RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 FAM84BQ96KN1 310 aaPredicted RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 SIGLEC11Q96RL6 698 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 PCYT2Q99447 389 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ERP44Q9BS26 406 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 SLC39A8Q9C0K1 460 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ECT2Q9H8V3 914 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 FANCFQ9NPI8 374 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 GSN-AS1Q9NRJ2 163 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 SERINC1Q9NRX5 453 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 GPR173Q9NS66 373 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 GKN1Q9NS71 199 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 RBM28Q9NW13 759 aaKnown RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 KLHL9Q9P2J3 617 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 RABL2AQ9UBK7 228 aaPredicted RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ARPP21Q9UBL0 812 aaPredicted RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 KCNJ14Q9UNX9 436 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 RUVBL2Q9Y230 463 aaKnown RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 WDR83OSQ9Y284 106 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 ZNF510Q9Y2H8 683 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 TMED3Q9Y3Q3 217 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 JRKLQ9Y4A0 524 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 YIPF1Q9Y548 306 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 DMRT1Q9Y5R6 373 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 NRKQ7Z2Y5 1582 aa3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 FNDC1Q4ZHG4 1894 aaPredicted RBP3.71□□□□□ -1.82
SFSWAP-211ENST00000542813 PCDH11YQ9BZA8 1340 aa3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 PRAG1Q86YV5 1406 aa3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 NEXMIFQ5QGS0 1516 aa3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 USP32Q8NFA0 1604 aa3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 A0A087WZY1 265 aa3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 A0A1B0GWJ7 208 aa3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 MED19A0JLT2 244 aaPredicted RBP3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 ANKDD1BA6NHY2 528 aa3.7□□□□□ -1.82
SFSWAP-211ENST00000542813 LINC01548A6NM66 108 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms