RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PTPN4P29074 926 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 HNF4AP41235 474 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 PROX2Q3B8N5 592 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 CATSPEREQ5SY80 951 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 FRG2Q64ET8 278 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 LCTLQ6UWM7 567 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 C17orf82Q86X59 251 aaPredicted RBP26.74■■□□□ 1.87
CCM2-218ENST00000541586 OR52E1Q8NGJ3 308 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 SMPDL3AQ92484 453 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 FRG2BQ96QU4 278 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 U3KQA8 63 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 RAB28P51157 221 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 NEK2P51955 445 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 ERVK-8P63133 956 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 UBE2IP63279 158 aaKnown RBP26.73■■□□□ 1.87
CCM2-218ENST00000541586 GUSBP11Q6P575 273 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 RINLQ6ZS11 566 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 LINC01555Q8NAE3 123 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 DEFB124Q8NES8 71 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 HMGCLL1Q8TB92 370 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 SLC5A11Q8WWX8 675 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 HAUS8Q9BT25 410 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 XKR8Q9H6D3 395 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 SLC40A1Q9NP59 571 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 POT1Q9NUX5 634 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 CBFA2T3O75081 653 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 CKMT1AP12532 417 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 GLB1P16278 677 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 PKLRP30613 574 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 DIO3P55073 304 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 HMGCS1Q01581 520 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 FNDC5Q8NAU1 212 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 JPH3Q8WXH2 748 aaPredicted RBP26.73■■□□□ 1.87
CCM2-218ENST00000541586 WDR34Q96EX3 536 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 SLC38A3Q99624 504 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 ACAT2Q9BWD1 397 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 RAB11FIP5Q9BXF6 653 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 ACPTQ9BZG2 426 aa26.73■■□□□ 1.87
CCM2-218ENST00000541586 A0A1W2PPV9 198 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 H0YIV9 168 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 PSMD12O00232 456 aaPredicted RBP26.72■■□□□ 1.87
CCM2-218ENST00000541586 CKMT2P17540 419 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 ALDH4A1P30038 563 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 FASLGP48023 281 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 PPM1FP49593 454 aaPredicted RBP26.72■■□□□ 1.87
CCM2-218ENST00000541586 STX1BP61266 288 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 GSTA3Q16772 222 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 IMPG1Q17R60 797 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 AP5B1Q2VPB7 878 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 CCDC157Q569K6 752 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 ATG9BQ674R7 924 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 PIP4P1Q86T03 277 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 Q8N9G6 341 aaPredicted RBP26.72■■□□□ 1.87
CCM2-218ENST00000541586 WDR20Q8TBZ3 569 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 PPP3R2Q96LZ3 170 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 EHD1Q9H4M9 534 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 KIR3DX1Q9H7L2 352 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 CDV3Q9UKY7 258 aaKnown RBP26.72■■□□□ 1.87
CCM2-218ENST00000541586 ICKQ9UPZ9 632 aa26.72■■□□□ 1.87
CCM2-218ENST00000541586 B2RBV5 119 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 C1GALT1C1LP0DN25 315 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 THRAP10827 490 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 IDO1P14902 403 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 NDUFS1P28331 727 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 PLA2G5P39877 138 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 DUSP3P51452 185 aaPredicted RBP26.71■■□□□ 1.87
CCM2-218ENST00000541586 NXPE4Q6UWF7 544 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 SNX32Q86XE0 403 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 FBXO27Q8NI29 283 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 SH3KBP1Q96B97 665 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 C1orf50Q9BV19 199 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 AIG1Q9NVV5 245 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 TAS2R1Q9NYW7 299 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 TAC3Q9UHF0 121 aa26.71■■□□□ 1.87
CCM2-218ENST00000541586 EME2A4GXA9 379 aaPredicted RBP26.7■■□□□ 1.87
CCM2-218ENST00000541586 NUDT21O43809 227 aaKnown RBP26.7■■□□□ 1.87
CCM2-218ENST00000541586 GPX3P22352 226 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 MNAT1P51948 309 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 KCNJ2P63252 427 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 EMX2Q04743 252 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 GPR18Q14330 331 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 HERC3Q15034 1050 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 PLCL1Q15111 1095 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.7■■□□□ 1.87
CCM2-218ENST00000541586 OR2L8Q8NGY9 312 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 RP9Q8TA86 221 aaKnown RBP26.7■■□□□ 1.87
CCM2-218ENST00000541586 CCDC74AQ96AQ1 378 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 CDC6Q99741 560 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 BTBD10Q9BSF8 475 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 PCBD2Q9H0N5 130 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 SDR39U1Q9NRG7 319 aaPredicted RBP26.7■■□□□ 1.87
CCM2-218ENST00000541586 EVA1BQ9NVM1 165 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 PCDHGA11Q9Y5H2 935 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 GPR45Q9Y5Y3 372 aa26.7■■□□□ 1.87
CCM2-218ENST00000541586 SERTM1A2A2V5 107 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 CYLC2Q14093 348 aaPredicted RBP26.7■■□□□ 1.86
CCM2-218ENST00000541586 RFTN2Q52LD8 501 aaPredicted RBP26.7■■□□□ 1.86
CCM2-218ENST00000541586 AGKQ53H12 422 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 PAOXQ6QHF9 649 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 TMEM26Q6ZUK4 368 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms