RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TOX3O15405 576 aaPredicted RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 PRPF4O43172 522 aaKnown RBP eCLIP16.01■□□□□ 0.153e-8■■□□□ 13.8
UBC-208ENST00000540700 SUV39H1O43463 412 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 CTSVO60911 334 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 SMIM24O75264 130 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 STK16O75716 305 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 S100BP04271 92 aaPredicted RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 EBLN1P0CF75 366 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 CDH1P12830 882 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 FOLR1P15328 257 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 NELFEP18615 380 aaKnown RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 ATP5F1P24539 256 aaPredicted RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 EEF1DP29692 281 aaKnown RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 TRA2AQ13595 282 aaKnown RBP eCLIP16.01■□□□□ 0.154e-10■■□□□ 11.4
UBC-208ENST00000540700 DEFB110Q30KQ9 67 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 CCDC153Q494R4 210 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 UNC50Q53HI1 259 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 FIGLAQ6QHK4 219 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 PAQR7Q86WK9 346 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 LIN37Q96GY3 246 aaPredicted RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 DPH7Q9BTV6 452 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 MECRQ9BV79 373 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 ZBTB26Q9HCK0 441 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 MRPS30Q9NP92 439 aaKnown RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 COPG2Q9UBF2 871 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 BTRCQ9Y297 605 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 LOXL2Q9Y4K0 774 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 A0A1B0GTL3 188 aa16■□□□□ 0.15
UBC-208ENST00000540700 OR2A25A4D2G3 310 aa16■□□□□ 0.15
UBC-208ENST00000540700 H7BY64 318 aa16■□□□□ 0.15
UBC-208ENST00000540700 K7EPI3 171 aa16■□□□□ 0.15
UBC-208ENST00000540700 PPP6CO00743 305 aa16■□□□□ 0.15
UBC-208ENST00000540700 PLD2O14939 933 aa16■□□□□ 0.15
UBC-208ENST00000540700 IPO13O94829 963 aaKnown RBP16■□□□□ 0.15
UBC-208ENST00000540700 ZBTB11O95625 1053 aaPredicted RBP16■□□□□ 0.15
UBC-208ENST00000540700 FGF3P11487 239 aaPredicted RBP16■□□□□ 0.15
UBC-208ENST00000540700 ITIH1P19827 911 aa16■□□□□ 0.15
UBC-208ENST00000540700 CD22P20273 847 aa16■□□□□ 0.15
UBC-208ENST00000540700 CCND1P24385 295 aa16■□□□□ 0.15
UBC-208ENST00000540700 VARSP26640 1264 aaKnown RBP16■□□□□ 0.15
UBC-208ENST00000540700 CMPK1P30085 196 aa16■□□□□ 0.15
UBC-208ENST00000540700 MLLT3P42568 568 aaPredicted RBP16■□□□□ 0.15
UBC-208ENST00000540700 CCR10P46092 362 aa16■□□□□ 0.15
UBC-208ENST00000540700 PRKAA2P54646 552 aa16■□□□□ 0.15
UBC-208ENST00000540700 CSNK1G2P78368 415 aa16■□□□□ 0.15
UBC-208ENST00000540700 MEF2AQ02078 507 aaPredicted RBP16■□□□□ 0.15
UBC-208ENST00000540700 CDC16Q13042 620 aa16■□□□□ 0.15
UBC-208ENST00000540700 LRRC70Q7Z2Q7 622 aa16■□□□□ 0.15
UBC-208ENST00000540700 PLD3Q8IV08 490 aa16■□□□□ 0.15
UBC-208ENST00000540700 C10orf107Q8IVU9 208 aa16■□□□□ 0.15
UBC-208ENST00000540700 D2HGDHQ8N465 521 aa16■□□□□ 0.15
UBC-208ENST00000540700 DNAJC22Q8N4W6 341 aa16■□□□□ 0.15
UBC-208ENST00000540700 SLC5A11Q8WWX8 675 aa16■□□□□ 0.15
UBC-208ENST00000540700 RNF31Q96EP0 1072 aa16■□□□□ 0.15
UBC-208ENST00000540700 ATP6V1G3Q96LB4 118 aa16■□□□□ 0.15
UBC-208ENST00000540700 PRAP1Q96NZ9 151 aa16■□□□□ 0.15
UBC-208ENST00000540700 PLCD4Q9BRC7 762 aa16■□□□□ 0.15
UBC-208ENST00000540700 C1QTNF3Q9BXJ4 246 aa16■□□□□ 0.15
UBC-208ENST00000540700 APMAPQ9HDC9 416 aa16■□□□□ 0.15
UBC-208ENST00000540700 DNAJC11Q9NVH1 559 aa16■□□□□ 0.15
UBC-208ENST00000540700 PCTPQ9UKL6 214 aa16■□□□□ 0.15
UBC-208ENST00000540700 GOLGA6L10A6NI86 522 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 EFCAB7A8K855 629 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 HAT1O14929 419 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 MYL2P10916 166 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 CPA3P15088 417 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 TSPAN8P19075 237 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 ALDH3A1P30838 453 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 ABATP80404 500 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 GPR19Q15760 415 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 PDK4Q16654 411 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 ZNF678Q5SXM1 525 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 CES4AQ5XG92 561 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 FBXO42Q6P3S6 717 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 NXPE4Q6UWF7 544 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 GOLGA7Q7Z5G4 137 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 TMPRSS11BQ86T26 416 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 C17orf64Q86WR6 236 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 CARFQ8N187 725 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 TEX9Q8N6V9 391 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 CCDC63Q8NA47 563 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 ZNF740Q8NDX6 193 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 ABHD11Q8NFV4 315 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 OR4K1Q8NGD4 311 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 ZNF483Q8TF39 744 aaPredicted RBP15.99■□□□□ 0.15
UBC-208ENST00000540700 PKNOX2Q96KN3 472 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 HAUS8Q9BT25 410 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 PCBD2Q9H0N5 130 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 CNOT10Q9H9A5 744 aaKnown RBP15.99■□□□□ 0.15
UBC-208ENST00000540700 MLXIPLQ9NP71 852 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 OXSMQ9NWU1 459 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 ANKMY1Q9P2S6 941 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 PILRAQ9UKJ1 303 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 MYO9AB2RTY4 2548 aa15.99■□□□□ 0.15
UBC-208ENST00000540700 FEZF1A0PJY2 475 aa15.98■□□□□ 0.15
UBC-208ENST00000540700 TMEM120BA0PK00 339 aa15.98■□□□□ 0.15
UBC-208ENST00000540700 H3BMH7 237 aa15.98■□□□□ 0.15
UBC-208ENST00000540700 DYNC1I1O14576 645 aa15.98■□□□□ 0.15
UBC-208ENST00000540700 OR7A17O14581 309 aa15.98■□□□□ 0.15
UBC-208ENST00000540700 HGSO14964 777 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms