RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 FAM189BP81408 668 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 ABRQ12979 859 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CSTF3Q12996 717 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 FGFBP1Q14512 234 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 MAD2L1BPQ15013 274 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TRNP1Q6NT89 227 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TMEM135Q86UB9 458 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 FAM124AQ86V42 546 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 LAX1Q8IWV1 398 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 FBXO30Q8TB52 745 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TEX47Q8TBZ9 253 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 UTP15Q8TED0 518 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TUBGCP3Q96CW5 907 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 WBP1Q96G27 269 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 SERPINB11Q96P15 392 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 SORCS2Q96PQ0 1159 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 PELOQ9BRX2 385 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 DPCDQ9BVM2 203 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TINAGL1Q9GZM7 467 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CD93Q9NPY3 652 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CISHQ9NSE2 258 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 MGAT4AQ9UM21 535 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 UBQLN1Q9UMX0 589 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 BAIAP2Q9UQB8 552 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 DERAQ9Y315 318 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 PTGDR2Q9Y5Y4 395 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 HNRNPCL2B2RXH8 293 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 POMCP01189 267 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 IFNA7P01567 189 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CXCL10P02778 98 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC2A4P14672 509 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 IGFBP6P24592 240 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 IGFBP5P24593 272 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CYP2F1P24903 491 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 PSMB4P28070 264 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 MEOX2P50222 304 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 PLK1P53350 603 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CDH8P55286 799 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 EMX2Q04743 252 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF91Q05481 1191 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TP53BP2Q13625 1128 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 RPS6KA2Q15349 733 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TBCEQ15813 527 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 COL28A1Q2UY09 1125 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF699Q32M78 642 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 MPP7Q5T2T1 576 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 KLHL17Q6TDP4 642 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 LRRTM3Q86VH5 581 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CEP97Q8IW35 865 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CLRN3Q8NCR9 226 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 OR52K1Q8NGK4 314 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 HTR3CQ8WXA8 447 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 UBE2FQ969M7 185 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 SGK3Q96BR1 496 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CNPY3Q9BT09 278 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 LRRC3Q9BY71 257 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 RC3H2Q9HBD1 1191 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 MRM3Q9HC36 420 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 SDR39U1Q9NRG7 319 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 RASSF1Q9NS23 344 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CATSPERZQ9NTU4 200 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CUEDC1Q9NWM3 386 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 UBQLN2Q9UHD9 624 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TRAV19A0A0A6YYK7 116 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC22A23A1A5C7 686 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 EFCAB10A6NFE3 127 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 MROH6A6NGR9 719 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ST8SIA5O15466 376 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 C1RP00736 705 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 EPOP01588 193 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 THP07101 528 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RPS17P08708 135 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 GPD1P21695 349 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CSKP41240 450 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RECQLP46063 649 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CAPZA2P47755 286 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RAB14P61106 215 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RPA4Q13156 261 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 KEAP1Q14145 624 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 Q3ZCU0 254 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 PDZK1Q5T2W1 519 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 FAM102AQ5T9C2 384 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 HTR3DQ70Z44 454 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CYP4Z1Q86W10 505 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 METTL23Q86XA0 190 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CHCHD4Q8N4Q1 142 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 OR4D10Q8NGI6 311 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 HPDLQ96IR7 371 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 QRFPRQ96P65 431 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 TTYH1Q9H313 450 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RHOJQ9H4E5 214 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 GALNT9Q9HCQ5 603 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 IL1RAPQ9NPH3 570 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SMPD4Q9NXE4 827 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 hCG_1807616A0A1W2PRN6 198 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 A8MT66 165 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 PCDH17O14917 1159 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms