RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ACSL4O60488 711 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 KLKB1P03952 638 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 RHOCP08134 193 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 RGS4P49798 205 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 MGAT3Q09327 533 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 CAMK2BQ13554 666 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 UGT8Q16880 541 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 CTXN3Q4LDR2 81 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 RSPO2Q6UXX9 243 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 EIF3MQ7L2H7 374 aaKnown RBP13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 STX19Q8N4C7 294 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ZBTB2Q8N680 514 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 GTF3C2Q8WUA4 911 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 WBP2Q969T9 261 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 ASIC5Q9NY37 505 aa13.48□□□□□ -0.25
SCNN1A-215ENST00000540037 H3BM21 787 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 TFECO14948 347 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF7P17097 686 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 PIK3CBP42338 1070 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 WNT3P56703 355 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 MED22Q15528 200 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 TTLL9Q3SXZ7 439 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 CARNMT1Q8N4J0 409 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 BEX2Q9BXY8 128 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 MBD1Q9UIS9 605 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 SEMA3DO95025 777 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 OAZ2O95190 189 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 KRT6AP02538 564 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 KRT6BP04259 564 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 IRF1P10914 325 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 GGT2P36268 569 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 KRT6CP48668 564 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 MRPS15P82914 257 aaKnown RBP13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 ARMC12Q5T9G4 340 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 STK40Q8N2I9 435 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 SPPL2AQ8TCT8 520 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 SKA2Q8WVK7 121 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 IL26Q9NPH9 171 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 MS4A12Q9NXJ0 267 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 RPS6KA6Q9UK32 745 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 TRPM7Q96QT4 1865 aa13.47□□□□□ -0.25
SCNN1A-215ENST00000540037 MAGEB17A8MXT2 336 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 E9PQ18 207 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 J3KTA2 159 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 RGS5O15539 181 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 SCN2BO60939 215 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 WDR47O94967 919 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 CLDN7O95471 211 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 ITPKAP23677 461 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 DGKAP23743 735 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 MAGEA11P43364 429 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 SLC15A1P46059 708 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 LIMK1P53667 647 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 TSTQ16762 297 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 DUOXA1Q1HG43 343 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 INO80DQ53TQ3 878 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 GPRC6AQ5T6X5 926 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 ZSWIM9Q86XI8 627 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 OR9Q2Q8NGE9 314 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 NELL1Q92832 810 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 MYDGFQ969H8 173 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 SH3KBP1Q96B97 665 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 OR2A14Q96R47 310 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 CCM2Q9BSQ5 444 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 AP3M1Q9Y2T2 418 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 PCDHB1Q9Y5F3 818 aa13.46□□□□□ -0.25
SCNN1A-215ENST00000540037 GCM2O75603 506 aaPredicted RBP13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 EPN2O95208 641 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 VNN2O95498 520 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 LAMP1P11279 417 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 HMGCLP35914 325 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 RPIAP49247 311 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 DUSP4Q13115 394 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 MAP2K5Q13163 448 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 NFATC2Q13469 925 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 TAB1Q15750 504 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 NFE2Q16621 373 aaPredicted RBP13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 SNAP47Q5SQN1 464 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 NOXRED1Q6NXP6 359 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 NEK5Q6P3R8 708 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 CCDC190Q86UF4 302 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 UBQLNLQ8IYU4 475 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 B3GNT7Q8NFL0 401 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 KBTBD8Q8NFY9 601 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 FCGR1BQ92637 280 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 TESCQ96BS2 214 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 ST6GAL2Q96JF0 529 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 TSEN34Q9BSV6 310 aaKnown RBP13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 GABARAPL3Q9BY60 117 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 HCSTQ9UBK5 93 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 WBP11Q9Y2W2 641 aaKnown RBP13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 LYVE1Q9Y5Y7 322 aa13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 CFAP20Q9Y6A4 193 aaKnown RBP13.46□□□□□ -0.26
SCNN1A-215ENST00000540037 AMD1P17707 334 aa13.45□□□□□ -0.26
SCNN1A-215ENST00000540037 GPX2P18283 190 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms