RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 TSPYL1Q9H0U9 437 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 CDT1Q9H211 546 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 FN3KQ9H479 309 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 TOR3AQ9H497 397 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 SFXN1Q9H9B4 322 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM120CQ9NX05 1096 aaKnown RBP3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 TRPM5Q9NZQ8 1165 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 HSFX1Q9UBD0 423 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 UPB1Q9UBR1 384 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 STK39Q9UEW8 545 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 KIAA1257Q9ULG3 409 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 BARX2Q9UMQ3 279 aaPredicted RBP3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 C15orf41Q9Y2V0 281 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 KMT2EQ8IZD2 1858 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF541Q9H0D2 1346 aa3.68□□□□□ -1.82
AC055720.1-201ENST00000539552 ZSWIM8A7E2V4 1837 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 AFDNP55196 1824 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 MRC1P22897 1456 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 NPC1L1Q9UHC9 1359 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 A0A1B0GTQ1 180 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM149AA5PLN7 773 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 ANKDD1BA6NHY2 528 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 KBTBD13C9JR72 458 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 F8VZ95 297 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SPECC1L-ADORA2AF8WAN1 911 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 K7ERQ8 282 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 PTGESO14684 152 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 PPM1DO15297 605 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 MAGEB2O15479 319 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SEC14L5O43304 696 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 PMPCBO75439 489 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 RSL1D1O76021 490 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 ZWINTO95229 277 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SERPINA3P01011 423 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 HLA-DQA2P01906 255 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC2A4P14672 509 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 TCF4P15884 667 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 HOXB9P17482 250 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CKMT2P17540 419 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 ACAT1P24752 427 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC6A6P31641 620 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 AKT2P31751 481 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 GKP32189 559 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 NF2P35240 595 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CETN2P41208 172 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CDKN1BP46527 198 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC6A12P48065 614 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 STARP49675 285 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 GPR143P51810 404 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF75DP51815 510 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 JAK3P52333 1124 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 AIF1P55008 147 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 EEFSECP57772 596 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 NXPH1P58417 271 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 MRPS34P82930 218 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 HSPB3Q12988 150 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 DNAJC3Q13217 504 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CUL1Q13616 776 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 DHX34Q14147 1143 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 KRT31Q15323 416 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 STXBP2Q15833 593 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 RPE65Q16518 533 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 TPD52L1Q16890 204 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SMTNL2Q2TAL5 461 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM174BQ3ZCQ3 159 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 USH1GQ495M9 461 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CDONQ4KMG0 1287 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 PLAC9Q5JTB6 97 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CCNYL2Q5T2Q4 361 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 LRIF1Q5T3J3 769 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM102AQ5T9C2 384 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 TMEM198Q66K66 360 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SP5Q6BEB4 398 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 AADACL2Q6P093 401 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM198BQ6UWH4 519 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 OLFML1Q6UWY5 402 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC39A5Q6ZMH5 540 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 HTR3DQ70Z44 454 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 DTX2Q86UW9 622 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SERINC5Q86VE9 423 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM228AQ86W67 206 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FOXP4Q8IVH2 680 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CD302Q8IX05 232 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 KLHDC8AQ8IYD2 350 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM9CQ8IZT9 166 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC43A2Q8N370 569 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM71CQ8NEG0 241 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 BBS1Q8NFJ9 593 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 OR8J1Q8NGP2 316 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 OR9A1PQ8NGU1 263 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CAGE1Q8TC20 777 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 DQX1Q8TE96 717 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 NTN5Q8WTR8 489 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 UBLCP1Q8WVY7 318 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 OIT3Q8WWZ8 545 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 ATL1Q8WXF7 558 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SOCS4Q8WXH5 440 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 NSMAFQ92636 917 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 DPF1Q92782 380 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms