RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CCT8P50990 548 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 PSMD7P51665 324 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 HMGCS1Q01581 520 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 MLF2Q15773 248 aaPredicted RBP16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 METRNLQ641Q3 311 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 SPATA19Q7Z5L4 167 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 OXR1Q8N573 874 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 CYGBQ8WWM9 190 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 MSANTD3Q96H12 275 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 SDR39U1Q9NRG7 319 aaPredicted RBP16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 C2orf42Q9NWW7 574 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 ASF1AQ9Y294 204 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 ARPC2O15144 300 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 ATE1O95260 518 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 RASAL1O95294 804 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 CHRNB1P11230 501 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 IDO1P14902 403 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLC6A2P23975 617 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 HALP42357 657 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 YBX1P67809 324 aaKnown RBP16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 CHIT1Q13231 466 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 RPS6KA2Q15349 733 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 NR6A1Q15406 480 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 RFTN2Q52LD8 501 aaPredicted RBP16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 SPRED1Q7Z699 444 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 FBXO15Q8NCQ5 510 aaPredicted RBP16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 FBXL20Q96IG2 436 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 VPS50Q96JG6 964 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 MOSPD1Q9UJG1 213 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 PLEKHM1Q9Y4G2 1056 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 KCNE1BA0A087WTH5 132 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 H0Y8X5 98 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 SCAMP1O15126 338 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 ACOX3O15254 700 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 CLOCKO15516 846 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 FOXD2O60548 495 aaPredicted RBP16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 CLIC3O95833 236 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 ACP5P13686 325 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 NEK2P51955 445 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 ERVK-8P63133 956 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 RPA4Q13156 261 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 AP5B1Q2VPB7 878 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 TMTC4Q5T4D3 741 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 PDZD3Q86UT5 571 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 PGBD3Q8N328 593 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 CHCHD4Q8N4Q1 142 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 L3MBTL4Q8NA19 623 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 OR5AR1Q8NGP9 310 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 OR56A3Q8NH54 315 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 TFGQ92734 400 aaPredicted RBP16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 USP7Q93009 1102 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 TEX37Q96LM6 180 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 GUCD1Q96NT3 240 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 BTBD1Q9H0C5 482 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 CD320Q9NPF0 282 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 TBC1D23Q9NUY8 699 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 AIG1Q9NVV5 245 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 GID8Q9NWU2 228 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 DNMT3AQ9Y6K1 912 aaPredicted RBP16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 CROCCQ5TZA2 2017 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 E7EQ34 232 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 H3BMQ9 156 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 TMX2-CTNND1H3BSU7 103 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 PDYNP01213 254 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 RELAQ04206 551 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 PMS2P3Q13401 168 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 PDCD4Q53EL6 469 aaKnown RBP16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 ZNF852Q6ZMS4 543 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 SYTL1Q8IYJ3 562 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 TRPV3Q8NET8 790 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 OR9A1PQ8NGU1 263 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 ZNF420Q8TAQ5 688 aaPredicted RBP16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 LRRC58Q96CX6 371 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 COX4I2Q96KJ9 171 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 COG8Q96MW5 612 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 NRTNQ99748 197 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLC29A3Q9BZD2 475 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 RPF2Q9H7B2 306 aaKnown RBP16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 DOLKQ9UPQ8 538 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLC17A4Q9Y2C5 497 aa16.49■□□□□ 0.23
PCDHB17P-201ENST00000539533 GPR89AB7ZAQ6 455 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 MAN2B1O00754 1011 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 EI24O14681 340 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 GPIP06744 558 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 GPR89BP0CG08 455 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 CD22P20273 847 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 IRF8Q02556 426 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 MLLT1Q03111 559 aaPredicted RBP16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 PRKG2Q13237 762 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 TSTA3Q13630 321 aaPredicted RBP16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 ABRAXAS1Q6UWZ7 409 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 TRIM46Q7Z4K8 759 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 RGL4Q8IZJ4 473 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 OFCC1Q8IZS5 231 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 DOK1Q99704 481 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 ITM2CQ9NQX7 267 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 C8orf4Q9NR00 106 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 PLAGL1Q9UM63 463 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 DUSP12Q9UNI6 340 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms