RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RBM24Q9BX46 236 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 NUSAP1Q9BXS6 441 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 WWP1Q9H0M0 922 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 C1orf21Q9H246 121 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 IL25Q9H293 177 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 Q9H8V8 135 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 FAM207AQ9NSI2 230 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 FAM212BQ9NTI7 297 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 POT1Q9NUX5 634 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 OR2W1Q9Y3N9 320 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 WIPI2Q9Y4P8 454 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TEX264Q9Y6I9 313 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 RAPGEF6Q8TEU7 1601 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 NOTCH4Q99466 2003 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CARMIL3Q8ND23 1372 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 IGSF1Q8N6C5 1336 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 A0A0G2JPF8 293 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TYW5A2RUC4 315 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC182A6NF36 153 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 HNRNPCL2B2RXH8 293 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 HNRNPCL3B7ZW38 293 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 H3BMM5 538 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 AKAP8O43823 692 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SLC28A2O43868 658 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 EXTL3O43909 919 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 EDN1P05305 212 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 LINC00271P0C7V0 271 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 HNRNPCL4P0DMR1 293 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CBSLP0DN79 551 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 LIFP15018 202 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TMOD1P28289 359 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CBSP35520 551 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PEX19P40855 299 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 GPC3P51654 580 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CD81P60033 236 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 KRTAP10-11P60412 298 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ACTN3Q08043 901 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 FHL2Q14192 279 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 GRB14Q14449 540 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 NFATC4Q14934 902 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TAB1Q15750 504 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SNAPC1Q16533 368 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC142Q17RM4 750 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ODF4Q2M2E3 257 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 DCAF4L1Q3SXM0 396 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 POM121L1PQ3SYA9 428 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 DNAJC21Q5F1R6 531 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SLC35D3Q5M8T2 416 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 MANEAQ5SRI9 462 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF770Q6IQ21 691 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 C3P1Q6ZMU1 363 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ANO5Q75V66 913 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ARHGAP22Q7Z5H3 698 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TMPRSS12Q86WS5 348 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF575Q86XF7 245 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM219Q86XT9 240 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CNTN4Q8IWV2 1026 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 RNF113BQ8IZP6 322 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 C1orf87Q8N0U7 546 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 C7orf57Q8NEG2 295 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 OR11H4Q8NGC9 324 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 OR6F1Q8NGZ6 308 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 FAM76AQ8TAV0 307 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM174Q8WUU8 243 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 DAZLQ92904 295 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 FAM46BQ96A09 425 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 C11orf52Q96A22 123 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ATG101Q9BSB4 218 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 RAB11FIP5Q9BXF6 653 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SHARPINQ9H0F6 387 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 DPAGT1Q9H3H5 408 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 A4GALTQ9NPC4 353 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 CHST11Q9NPF2 352 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 NPAP1Q9NZP6 1156 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 AKAP7Q9P0M2 348 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SUN2Q9UH99 717 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PRDM4Q9UKN5 801 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 BLOC1S6Q9UL45 172 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SPATA2Q9UM82 520 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 AGTPBP1Q9UPW5 1226 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 KCNK6Q9Y257 313 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SNX5Q9Y5X3 404 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PRSS21Q9Y6M0 314 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SNED1Q8TER0 1413 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 NSD2O96028 1365 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PARD3Q8TEW0 1356 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PDS5AQ29RF7 1337 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PEG3Q9GZU2 1588 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ANKUB1A6NFN9 424 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 A6NL46 340 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF263O14978 683 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD28O15084 1053 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 MID1O15344 667 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 SSX4O60224 188 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PALMO75781 387 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 BCAS2O75934 225 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 TRUB2O95900 331 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 DCNP07585 359 aaKnown RBP0.97□□□□□ -2.25
HIF1A-204ENST00000539097 BCKDHAP12694 445 aa0.97□□□□□ -2.25
HIF1A-204ENST00000539097 PFKFB1P16118 471 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms