RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 SORBS2O94875 1100 aaKnown RBP11□□□□□ -0.65
RTN3-209ENST00000538995 CYC1P08574 325 aa11□□□□□ -0.65
RTN3-209ENST00000538995 ANXA5P08758 320 aa11□□□□□ -0.65
RTN3-209ENST00000538995 GSTA2P09210 222 aa11□□□□□ -0.65
RTN3-209ENST00000538995 ZGLP1P0C6A0 271 aa11□□□□□ -0.65
RTN3-209ENST00000538995 GRK3P35626 688 aa11□□□□□ -0.65
RTN3-209ENST00000538995 SLC26A3P40879 764 aa11□□□□□ -0.65
RTN3-209ENST00000538995 CD97P48960 835 aa11□□□□□ -0.65
RTN3-209ENST00000538995 FOXL2P58012 376 aa11□□□□□ -0.65
RTN3-209ENST00000538995 CSNK1G2P78368 415 aa11□□□□□ -0.65
RTN3-209ENST00000538995 KLC1Q07866 573 aa11□□□□□ -0.65
RTN3-209ENST00000538995 C2orf54Q08AI8 447 aa11□□□□□ -0.65
RTN3-209ENST00000538995 NAE1Q13564 534 aa11□□□□□ -0.65
RTN3-209ENST00000538995 RBBP7Q16576 425 aa11□□□□□ -0.65
RTN3-209ENST00000538995 PPP1R3AQ16821 1122 aa11□□□□□ -0.65
RTN3-209ENST00000538995 HKDC1Q2TB90 917 aa11□□□□□ -0.65
RTN3-209ENST00000538995 TUBB8Q3ZCM7 444 aa11□□□□□ -0.65
RTN3-209ENST00000538995 IGFL3Q6UXB1 125 aa11□□□□□ -0.65
RTN3-209ENST00000538995 SYT10Q6XYQ8 523 aa11□□□□□ -0.65
RTN3-209ENST00000538995 MBOAT1Q6ZNC8 495 aa11□□□□□ -0.65
RTN3-209ENST00000538995 DTWD1Q8N5C7 304 aa11□□□□□ -0.65
RTN3-209ENST00000538995 ABHD11Q8NFV4 315 aa11□□□□□ -0.65
RTN3-209ENST00000538995 OR56A3Q8NH54 315 aa11□□□□□ -0.65
RTN3-209ENST00000538995 TM9SF4Q92544 642 aa11□□□□□ -0.65
RTN3-209ENST00000538995 CDKL2Q92772 493 aa11□□□□□ -0.65
RTN3-209ENST00000538995 MIB2Q96AX9 1013 aa11□□□□□ -0.65
RTN3-209ENST00000538995 PRAP1Q96NZ9 151 aa11□□□□□ -0.65
RTN3-209ENST00000538995 MCMBPQ9BTE3 642 aa11□□□□□ -0.65
RTN3-209ENST00000538995 CRB3Q9BUF7 120 aa11□□□□□ -0.65
RTN3-209ENST00000538995 SARGQ9BW04 601 aa11□□□□□ -0.65
RTN3-209ENST00000538995 TGIF2Q9GZN2 237 aa11□□□□□ -0.65
RTN3-209ENST00000538995 DPH5Q9H2P9 285 aa11□□□□□ -0.65
RTN3-209ENST00000538995 SOX17Q9H6I2 414 aaPredicted RBP11□□□□□ -0.65
RTN3-209ENST00000538995 SYNPO2LQ9H987 977 aa11□□□□□ -0.65
RTN3-209ENST00000538995 MKKSQ9NPJ1 570 aaPredicted RBP11□□□□□ -0.65
RTN3-209ENST00000538995 ABCF3Q9NUQ8 709 aa11□□□□□ -0.65
RTN3-209ENST00000538995 GRHL1Q9NZI5 618 aa11□□□□□ -0.65
RTN3-209ENST00000538995 FBXL4Q9UKA2 621 aa11□□□□□ -0.65
RTN3-209ENST00000538995 MAP4K5Q9Y4K4 846 aa11□□□□□ -0.65
RTN3-209ENST00000538995 LRRK2Q5S007 2527 aa11□□□□□ -0.65
RTN3-209ENST00000538995 PCSK5Q92824 1860 aa11□□□□□ -0.65
RTN3-209ENST00000538995 MED13Q9UHV7 2174 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 H0YIG0 161 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 P2RX6O15547 441 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 FOXS1O43638 330 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 ACPPP15309 386 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 VARSP26640 1264 aaKnown RBP10.99□□□□□ -0.65
RTN3-209ENST00000538995 CDKL1Q00532 357 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 POU4F1Q01851 419 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 CKAP4Q07065 602 aaKnown RBP10.99□□□□□ -0.65
RTN3-209ENST00000538995 KIRREL2Q6UWL6 708 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 SBSNQ6UWP8 590 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 VN1R4Q7Z5H5 301 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 ADAMTSL2Q86TH1 951 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 PLD3Q8IV08 490 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 C17orf53Q8N3J3 647 aaPredicted RBP10.99□□□□□ -0.65
RTN3-209ENST00000538995 AMER3Q8N944 861 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 CAMKVQ8NCB2 501 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 PNPLA2Q96AD5 504 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 ATG10Q9H0Y0 220 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 SAYSD1Q9NPB0 183 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 TRPC4Q9UBN4 977 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 C3orf18Q9UK00 162 aa10.99□□□□□ -0.65
RTN3-209ENST00000538995 PCM1Q15154 2024 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 TCRBV9S1A1TA0A576 114 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 MAP2K7O14733 419 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 NSA2O95478 260 aaKnown RBP10.98□□□□□ -0.65
RTN3-209ENST00000538995 HPP00738 406 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 SLC35G6P0C7Q6 338 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 CDH1P12830 882 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 NPPBP16860 134 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 ITGA3P26006 1051 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 BCL6P41182 706 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 AVPR1BP47901 424 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 HNMTP50135 292 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 CCR8P51685 355 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 TAS2R39P59534 338 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 MRPS25P82663 173 aaKnown RBP10.98□□□□□ -0.65
RTN3-209ENST00000538995 NADK2Q4G0N4 442 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 IRAK1BP1Q5VVH5 260 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 SLC6A19Q695T7 634 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 TMEM214Q6NUQ4 689 aaKnown RBP10.98□□□□□ -0.65
RTN3-209ENST00000538995 JMJD6Q6NYC1 403 aaPredicted RBP10.98□□□□□ -0.65
RTN3-209ENST00000538995 TMEM207Q6UWW9 146 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 SHISA6Q6ZSJ9 500 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 ATCAYQ86WG3 371 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 TMEM151BQ8IW70 566 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 TBC1D19Q8N5T2 526 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 RBMXL3Q8N7X1 1067 aaKnown RBP10.98□□□□□ -0.65
RTN3-209ENST00000538995 OR11G2Q8NGC1 345 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 OR4K1Q8NGD4 311 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 TM4SF19Q96DZ7 209 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 MMABQ96EY8 250 aaPredicted RBP10.98□□□□□ -0.65
RTN3-209ENST00000538995 TSPAN17Q96FV3 270 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 CPNE1Q99829 537 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 ZNF552Q9H707 407 aaPredicted RBP10.98□□□□□ -0.65
RTN3-209ENST00000538995 TXNDC16Q9P2K2 825 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 SH2B3Q9UQQ2 575 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 OARD1Q9Y530 152 aa10.98□□□□□ -0.65
RTN3-209ENST00000538995 RP1L1Q8IWN7 2480 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms