RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 DYNC2LI1Q8TCX1 351 aa6.65□□□□□ -1.34
SCAPER-203ENST00000538941 GEMIN6Q8WXD5 167 aaKnown RBP6.65□□□□□ -1.34
SCAPER-203ENST00000538941 CLP1Q92989 425 aaKnown RBP6.65□□□□□ -1.34
SCAPER-203ENST00000538941 CMTM7Q96FZ5 175 aa6.65□□□□□ -1.34
SCAPER-203ENST00000538941 MED30Q96HR3 178 aa6.65□□□□□ -1.34
SCAPER-203ENST00000538941 FNDC11Q9BVV2 318 aa6.65□□□□□ -1.34
SCAPER-203ENST00000538941 GON7Q9BXV9 100 aa6.65□□□□□ -1.34
SCAPER-203ENST00000538941 AMBRA1Q9C0C7 1298 aa6.65□□□□□ -1.34
SCAPER-203ENST00000538941 SGK2Q9HBY8 427 aa6.65□□□□□ -1.34
SCAPER-203ENST00000538941 SPIN1Q9Y657 262 aaPredicted RBP6.65□□□□□ -1.34
SCAPER-203ENST00000538941 MEIOCA2RUB1 952 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 A8MX80 341 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 FXYD1O00168 92 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 GLUD1P00367 558 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 CAPNS1P04632 268 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 RPS3P23396 243 aaKnown RBP eCLIP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 GDF5P43026 501 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 MAP2K3P46734 347 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 CDH4P55283 916 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ABATP80404 500 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 CHIT1Q13231 466 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 SCARB2Q14108 478 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 BCL7AQ4VC05 210 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 TIGD5Q53EQ6 642 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 KLHL22Q53GT1 634 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 LETMD1Q6P1Q0 360 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 LRRC70Q7Z2Q7 622 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ARHGAP12Q8IWW6 846 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 FAM46DQ8NEK8 389 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 AKAP1Q92667 903 aaKnown RBP eCLIP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ZNF583Q96ND8 569 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 MRPL9Q9BYD2 267 aaKnown RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 HOXD1Q9GZZ0 328 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 OR51E2Q9H255 320 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 SLC32A1Q9H598 525 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 TPT1P8Q9HAU6 139 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 TNFRSF12AQ9NP84 129 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 OPN1SWP03999 348 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 CDK1P06493 297 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 TNNI3P19429 210 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 EFNA1P20827 205 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ARNTP27540 789 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 STAT5AP42229 794 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 PPP2R2BQ00005 443 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 SOX4Q06945 474 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 HNRNPA0Q13151 305 aaKnown RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 TUSC3Q13454 348 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 GANABQ14697 944 aaKnown RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 CTF1Q16619 201 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 HKDC1Q2TB90 917 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 GTDC1Q4AE62 458 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 RFTN2Q52LD8 501 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 MS4A13Q5J8X5 152 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 USP45Q70EL2 814 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 BTLAQ7Z6A9 289 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 DENND1CQ8IV53 801 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 RIMKLAQ8IXN7 391 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 CELF2-AS1Q8N7Q2 184 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ZNF431Q8TF32 576 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 DEDD2Q8WXF8 326 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ASB15Q8WXK1 588 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ZNF566Q969W8 418 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 IL4I1Q96RQ9 567 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 ZNF607Q96SK3 696 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 SMAD5Q99717 465 aaKnown RBP6.65□□□□□ -1.35
SCAPER-203ENST00000538941 AASSQ9UDR5 926 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 MAP4K5Q9Y4K4 846 aa6.65□□□□□ -1.35
SCAPER-203ENST00000538941 A0A1W2PRG6 482 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 ARL5CA6NH57 179 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 PDPK1O15530 556 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 PRAMEF11O60813 436 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SERPIND1P05546 499 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 C8GP07360 202 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 OR4Q2P0C623 313 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 TCF3P15923 654 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 ACVRL1P37023 503 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SPAM1P38567 509 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 RPS5P46782 204 aaKnown RBP6.64□□□□□ -1.35
SCAPER-203ENST00000538941 CLDN8P56748 225 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 PTSQ03393 145 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SEMA3BQ13214 749 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SERINC3Q13530 473 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 PCBP2Q15366 365 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SNAPC1Q16533 368 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SMN1Q16637 294 aaKnown RBP6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SLX4IPQ5VYV7 408 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 BHLHB9Q6PI77 547 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 AQP11Q8NBQ7 271 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 DENND6BQ8NEG7 585 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 DOHHQ9BU89 302 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SPATA9Q9BWV2 254 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 TUBB1Q9H4B7 451 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 RNF121Q9H920 327 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 IL1RAPQ9NPH3 570 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SEMA3GQ9NS98 782 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 NUFIP1Q9UHK0 495 aaKnown RBP6.64□□□□□ -1.35
SCAPER-203ENST00000538941 RIMKLBQ9ULI2 386 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 NCKAP1Q9Y2A7 1128 aa6.64□□□□□ -1.35
SCAPER-203ENST00000538941 SLC9A8Q9Y2E8 581 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms