RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	PDXP	Q96GD0	296 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	COX14	Q96I36	57 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	C9orf72	Q96LT7	481 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	C8orf49	Q96NF6	230 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	WWC2-AS2	Q96NR7	200 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PANX3	Q96QZ0	392 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SELENOS	Q9BQE4	189 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	EDEM2	Q9BV94	578 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	GSDMC	Q9BYG8	508 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	OSGEPL1	Q9H4B0	414 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	GAREM1	Q9H706	876 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	FGF22	Q9HCT0	170 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TMEM9B	Q9NQ34	198 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	MRPL40	Q9NQ50	206 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	FSCN3	Q9NQT6	498 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TM7SF3	Q9NS93	570 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	INTS10	Q9NVR2	710 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	NSMCE4A	Q9NXX6	385 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	IL1RAPL1	Q9NZN1	696 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ATXN10	Q9UBB4	475 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SPAST	Q9UBP0	616 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	GNPTG	Q9UJJ9	305 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SUFU	Q9UMX1	484 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	IKBKG	Q9Y6K9	419 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	DGKB	Q9Y6T7	804 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TP53BP1	Q12888	1972 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SDK1	Q7Z5N4	2213 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	VCAN	P13611	3396 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	CACNA1H	O95180	2353 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	IGLV3-16	A0A075B6K0	115 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266		A0A1B0GTQ1	180 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	TCRBV9S1A1T	A0A576	114 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	CCT8L1P	A6NM43	557 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	AGAP14	A8MT82	685 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PDZK1P1	A8MUH7	402 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266		B8ZZF3	427 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	LMO7DN	F2Z398	122 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PRMT5	O14744	637 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	KPNA5	O15131	536 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	RGS16	O15492	202 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	FFAR2	O15552	330 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	FLRT2	O43155	660 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	AQP9	O43315	295 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	HOXA3	O43365	443 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	OR1I1	O60431	355 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PIAS2	O75928	621 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	SNUPN	O95149	360 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ATP6V1G2	O95670	118 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	GAST	P01350	101 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	APOA4	P06727	396 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF883	P0CG24	379 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PRSS56	P0CW18	603 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ALPPL2	P10696	532 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ACP5	P13686	325 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC2A4	P14672	509 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	GYPE	P15421	78 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF8	P17098	575 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	CALR	P27797	417 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	EPHA8	P29322	1005 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ATP5D	P30049	168 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	SSTR1	P30872	391 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ACTR1B	P42025	376 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC1A2	P43004	574 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	GRK6	P43250	576 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ARCN1	P48444	511 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PRLHR	P49683	370 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PMS2	P54278	862 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ADAR	P55265	1226 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PER3	P56645	1201 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ACTR1A	P61163	376 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ILF2	Q12905	390 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	EIF2B5	Q13144	721 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC14A1	Q13336	389 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	CTBP1	Q13363	440 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	NAB1	Q13506	487 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	BOP1	Q14137	746 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	FRG1	Q14331	258 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ODF1	Q14990	250 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	KYNU	Q16719	465 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	TYSND1	Q2T9J0	566 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	UAP1L1	Q3KQV9	507 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	BCL7A	Q4VC05	210 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	SYTL3	Q4VX76	610 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	KHDC1	Q4VXA5	237 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PYCR3	Q53H96	274 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	PRAMEF14	Q5SWL7	426 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	TPRG1L	Q5T0D9	272 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC30A9	Q6PML9	568 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	LVRN	Q6Q4G3	990 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	TMEM220	Q6QAJ8	160 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266		Q6ZSN1	163 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	KIAA0408	Q6ZU52	694 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	TAOK1	Q7L7X3	1001 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	CHST15	Q7LFX5	561 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ASCL5	Q7RTU5	278 aa		4.2	□□□□□ -1.74
SNHG1-208	ENST00000538266	ADGRG6	Q86SQ4	1221 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms