RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TRAPPC9Q96Q05 1148 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 RAB6CQ9H0N0 254 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 SEC61A2Q9H9S3 476 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZNF334Q9HCZ1 680 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 PDLIM7Q9NR12 457 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 MCUBQ9NWR8 336 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 GDE1Q9NZC3 331 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 SPATA7Q9P0W8 599 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TMEM59LQ9UK28 342 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PADI2Q9Y2J8 665 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 HCFC2Q9Y5Z7 792 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 IRGMA1A4Y4 181 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FAM234BA2RU67 622 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 BCKDKO14874 412 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NPC1O15118 1278 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OPN1SWP03999 348 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PRPS1L1P21108 318 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CST5P28325 142 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 CHN2P52757 468 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 RPS15P62841 145 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 SHHQ15465 462 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 Q6ZSR6 202 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZCCHC7Q8N3Z6 543 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 C2CD4AQ8NCU7 369 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 EFHD2Q96C19 240 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 TOX2Q96NM4 488 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 AKTIPQ9H8T0 292 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 B3GAT2Q9NPZ5 323 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OXSMQ9NWU1 459 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 LGALS13Q9UHV8 139 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NUMBLQ9Y6R0 609 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 MYH11P35749 1972 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TMEM265A0A087WTH1 108 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PRORSD1PA6NEY8 169 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FAM159BA6NKW6 160 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NPIPA5E9PKD4 350 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZBTB22O15209 634 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TCEA3O75764 348 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CLCN4P51793 760 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 SNTA1Q13424 505 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PDK3Q15120 406 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FBXO43Q4G163 708 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CLEC12AQ5QGZ9 265 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NOXRED1Q6NXP6 359 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PACS2Q86VP3 889 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OR10H4Q8NGA5 316 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 GIPC3Q8TF64 312 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FAR1Q8WVX9 515 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NSMCE3Q96MG7 304 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 GFM1Q96RP9 751 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 FAM192AQ9GZU8 254 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PLGRKTQ9HBL7 147 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TRIM39Q9HCM9 518 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NDUFA13Q9P0J0 144 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NPIPA1Q9UND3 350 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OAS3Q9Y6K5 1087 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 A6NL46 340 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 C6orf47O95873 294 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 HNRNPA2B1P22626 353 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 CASP6P55212 293 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OR4D2P58180 307 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FOLH1Q04609 750 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ITGADQ13349 1161 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZDHHC21Q8IVQ6 265 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 C3orf58Q8NDZ4 430 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OR52E4Q8NGH9 312 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PMM1Q92871 262 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 NKD1Q969G9 470 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 IMP4Q96G21 291 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 CIB1Q99828 191 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 RBM4BQ9BQ04 359 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 RBM4Q9BWF3 364 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 BRD7Q9NPI1 651 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 DNMT3BQ9UBC3 853 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 RARRES3Q9UL19 164 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 OR5K4A6NMS3 321 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 EIF1AYO14602 144 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 CPNE3O75131 537 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 ADAMTS4O75173 837 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 SNX4O95219 450 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PAPSS2O95340 614 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 SRCP12931 536 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 DGKQP52824 942 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 VLDLRP98155 873 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CD47Q08722 323 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 DEFB110Q30KQ9 67 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FAM214AQ32MH5 1076 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 SLC44A4Q53GD3 710 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 LCN1P1Q5VSP4 162 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FAM69BQ5VUD6 431 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 TDHQ8IZJ6 230 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 PGAM4Q8N0Y7 254 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CNTD1Q8N815 330 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 GLB1L3Q8NCI6 653 aaPredicted RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 BORCS6Q96GS4 357 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 FANCFQ9NPI8 374 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 LYARQ9NX58 379 aaKnown RBP5.2□□□□□ -1.58
LRP6-203ENST00000538239 ZDHHC2Q9UIJ5 367 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 SIT1Q9Y3P8 196 aa5.2□□□□□ -1.58
LRP6-203ENST00000538239 CASKO14936 926 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms