RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 A0A1W2PRU2 124 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CLDN25C9JDP6 229 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 LAMP1P11279 417 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CYP4B1P13584 511 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 NR4A1P22736 598 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 PPIBP23284 216 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 FMO3P31513 532 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 RGS21Q2M5E4 152 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 KIAA1614Q5VZ46 1190 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 Q6ZVU0 165 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 ZBTB46Q86UZ6 589 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 PARP8Q8N3A8 854 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 OR2A12Q8NGT7 310 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 KRT84Q9NSB2 600 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 COL4A6Q14031 1691 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 GABRR3A8MPY1 467 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 UPK3BL1B0FP48 263 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 UPK3BL2E5RIL1 263 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 YY2O15391 372 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 DIRAS1O95057 198 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ABCB1P08183 1280 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 FSHRP23945 695 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 HOXA9P31269 272 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ITGA1P56199 1179 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 CREMQ03060 361 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 MVKQ03426 396 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ITGADQ13349 1161 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ZNF846Q147U1 533 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 PROX2Q3B8N5 592 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 CPTPQ5TA50 214 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ASTLQ6HA08 431 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 GRHL2Q6ISB3 625 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 FAHD1Q6P587 224 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 Q6ZVL8 140 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 TMEM25Q86YD3 366 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 CLECL1Q8IZS7 167 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 NAT16Q8N8M0 369 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ATG16L2Q8NAA4 619 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ZNF540Q8NDQ6 660 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 CHCHD3Q9NX63 227 aaKnown RBP15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 BTBD3Q9Y2F9 522 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 COQ6Q9Y2Z9 468 aa15.49■□□□□ 0.07
CHMP1A-202ENST00000535997 ARHGEF33A8MVX0 844 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 E7EQ34 232 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 SCAMP2O15127 329 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 GJA1P17302 382 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 VIPR1P32241 457 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 RECQLP46063 649 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 ST13P50502 369 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 ATN1P54259 1190 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 CSNK2BP67870 215 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 IQCCQ4KMZ1 466 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 ANXA8L1Q5VT79 327 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 AGTRAPQ6RW13 159 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 HSD11B1LQ7Z5J1 315 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 CAMKMTQ7Z624 323 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 GALNT10Q86SR1 603 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 KLHDC8AQ8IYD2 350 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 SVOPQ8N4V2 548 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 TRAM1L1Q8N609 369 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 DPH2Q9BQC3 489 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 HMG20AQ9NP66 347 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 PCDH12Q9NPG4 1184 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 RAD18Q9NS91 495 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 THUMPD1Q9NXG2 353 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 KIF17Q9P2E2 1029 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 FZD4Q9ULV1 537 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 DGKBQ9Y6T7 804 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 OR2AG2A6NM03 316 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 RGS10O43665 173 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 C9P02748 559 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 PABPC1P11940 636 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 OPRL1P41146 370 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 RXRGP48443 463 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 LRRC74AQ0VAA2 488 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 NPRL3Q12980 569 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 NAE1Q13564 534 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 DDX39BQ13838 428 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 MAD2L1BPQ15013 274 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 IGFN1Q86VF2 1251 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 TMEM159Q96B96 161 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 SH3KBP1Q96B97 665 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 COQ8BQ96D53 544 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 YIPF6Q96EC8 236 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 C7orf34Q96L11 122 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 EPYCQ99645 322 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 ZSCAN5AQ9BUG6 496 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 SMG9Q9H0W8 520 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 RC3H2Q9HBD1 1191 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 SGK2Q9HBY8 427 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 PCDHGB3Q9Y5G1 929 aa15.48■□□□□ 0.07
CHMP1A-202ENST00000535997 C1orf226A1L170 272 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 M0R3G1 203 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 SUV39H1O43463 412 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 CLCA4Q14CN2 919 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 PDE12Q6L8Q7 609 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 PRSS48Q7RTY5 328 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 SLCO6A1Q86UG4 719 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 CHTF18Q8WVB6 975 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms