RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 E2F3O00716 465 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 FOXS1O43638 330 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 NRDCO43847 1150 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 ALOX12BO75342 701 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 STSP08842 583 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 HOXB4P17483 251 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 GABRB3P28472 473 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 IMPA1P29218 277 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 RPA3P35244 121 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 SLC26A3P40879 764 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 ABATP80404 500 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 MPP1Q00013 466 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 KLC1Q07866 573 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 CUL1Q13616 776 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 THOC5Q13769 683 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 MUM1Q2TAK8 710 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 TTLL9Q3SXZ7 439 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 GARNL3Q5VVW2 1013 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 ICE2Q659A1 982 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 CDH24Q86UP0 819 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 LAPTM4BQ86VI4 370 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 CNTN4Q8IWV2 1026 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 METTL27Q8N6F8 245 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 PPFIBP2Q8ND30 876 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 ITLN2Q8WWU7 325 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 MVB12AQ96EY5 273 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 GPR21Q99679 349 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 MESP1Q9BRJ9 268 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 TGIF2Q9GZN2 237 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 PLAC1Q9HBJ0 212 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 C20orf96Q9NUD7 363 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 ZNF282Q9UDV7 671 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 TAC3Q9UHF0 121 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 PCYOX1Q9UHG3 505 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 CDC23Q9UJX2 597 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 SNX12Q9UMY4 172 aa9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 RUVBL1Q9Y265 456 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 ANKHD1Q8IWZ3 2542 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
CLSTN3-203ENST00000534830 DNALI1O14645 258 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 ZBTB14O43829 449 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 EIF2S1P05198 315 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 EZRP15311 586 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 SSTR2P30874 369 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 CARSP49589 748 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 KRTAP10-9P60411 292 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 SNRPNP63162 240 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 FAM53BQ14153 422 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 CRYMQ14894 314 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 HKDC1Q2TB90 917 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 TUBB8Q3ZCM7 444 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 MSS51Q4VC12 460 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 HSP90AA5PQ58FG0 334 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 BNC2Q6ZN30 1099 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 SHISA6Q6ZSJ9 500 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 GALNT7Q86SF2 657 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 CPNE9Q8IYJ1 553 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 ZNF295-AS1Q8N0V1 137 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 AMER3Q8N944 861 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 PPP4R1Q8TF05 950 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 FAR1Q8WVX9 515 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 MIEF2Q96C03 454 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 FAM167BQ9BTA0 163 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 LHPPQ9H008 270 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 KCNF1Q9H3M0 494 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 IARS2Q9NSE4 1012 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 CSAG2Q9Y5P2 127 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 MAD1L1Q9Y6D9 718 aa9.56□□□□□ -0.88
CLSTN3-203ENST00000534830 KCNE1BA0A087WTH5 132 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 SMAPO00193 183 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 HAT1O14929 419 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 P2RX6O15547 441 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 VPS26AO75436 327 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 CCNDBP1O95273 360 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 TTC4O95801 387 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 HPP00738 406 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 AHSGP02765 367 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 COX6A1P12074 109 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 PGAM1P18669 254 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 HRH2P25021 359 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 EFNA3P52797 238 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 OCA2Q04671 838 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 DHX9Q08211 1270 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 CDC16Q13042 620 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 PTK6Q13882 451 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 DSG2Q14126 1118 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 RBBP7Q16576 425 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 ZNF630Q2M218 657 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 AGAP7PQ5VUJ5 663 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 UGT3A1Q6NUS8 523 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 TMEM205Q6UW68 189 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 UBE2R2Q712K3 238 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 PIWIL4Q7Z3Z4 852 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 PCGF5Q86SE9 256 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 MRGPRGQ86SM5 289 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 IGDCC3Q8IVU1 814 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 CSNK1A1LQ8N752 337 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 EEF1AKMT1Q8WVE0 214 aa9.55□□□□□ -0.88
CLSTN3-203ENST00000534830 VPS50Q96JG6 964 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms