RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	SOST	Q9BQB4	213 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ITPA	Q9BY32	194 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ATAD3A	Q9NVI7	634 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	KLK4	Q9Y5K2	254 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ARHGAP33	O14559	1287 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	FFAR1	O14842	300 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	HAT1	O14929	419 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	SSX4	O60224	188 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	PTTG1	O95997	202 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	GALT	P07902	379 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	PIP	P12273	146 aa	Predicted RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	IDS	P22304	550 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	DGKA	P23743	735 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ATP5C1	P36542	298 aa	Known RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	XCR1	P46094	333 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	DUSP4	Q13115	394 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	CAMK2G	Q13555	558 aa	Predicted RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	GPR50	Q13585	617 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	CHRNA6	Q15825	494 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF79	Q15937	498 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF385B	Q569K4	471 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	FUT10	Q6P4F1	479 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	DOK6	Q6PKX4	331 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	GCNT7	Q6ZNI0	430 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897		Q6ZPB1	254 aa	Predicted RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	GALNT10	Q86SR1	603 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	TSPAN33	Q86UF1	283 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	SLC22A16	Q86VW1	577 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	PARP16	Q8N5Y8	322 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	TMCO5A	Q8N6Q1	288 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	SCAI	Q8N9R8	606 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	TTC29	Q8NA56	475 aa	Predicted RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF485	Q8NCK3	441 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	SETD9	Q8NE22	299 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	OR7A2P	Q8NGA2	310 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	OR6F1	Q8NGZ6	308 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	FCGR1B	Q92637	280 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	WDFY2	Q96P53	400 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	SLC22A12	Q96S37	553 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	DPY30	Q9C005	99 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	TMEM38A	Q9H6F2	299 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	RNF167	Q9H6Y7	350 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	BRF2	Q9HAW0	419 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	TRIM39	Q9HCM9	518 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	CCNB1IP1	Q9NPC3	277 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	GKN1	Q9NS71	199 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ATP6V1H	Q9UI12	483 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	ACAD8	Q9UKU7	415 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	FCF1	Q9Y324	198 aa	Known RBP	4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	TSC22D4	Q9Y3Q8	395 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	TESMIN	Q9Y4I5	508 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	PCDHB11	Q9Y5F2	797 aa		4.27	□□□□□ -1.73
CTSC-208	ENST00000533897	MKI67	P46013	3256 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CCDC88C	Q9P219	2028 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZAR1L	A6NP61	321 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CLCA1	A8K7I4	914 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	FFAR3	O14843	346 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SCAMP2	O15127	329 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GPR42	O15529	346 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RGS10	O43665	173 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	LILRB5	O75023	590 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	STK16	O75716	305 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SEMA3D	O95025	777 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CLDN7	O95471	211 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	C9	P02748	559 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	FABP3	P05413	133 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ENG	P17813	658 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GADD45A	P24522	165 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ITGB7	P26010	798 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	C21orf33	P30042	268 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	IRS1	P35568	1242 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CASP3	P42574	277 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	HNMT	P50135	292 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZRANB3	Q5FWF4	1079 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CRB2	Q5IJ48	1285 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ADNP2	Q6IQ32	1131 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ERICH5	Q6P6B1	374 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	FAM151B	Q6UXP7	276 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RFLNA	Q6ZTI6	216 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GALNT5	Q7Z7M9	940 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ARMC8	Q8IUR7	673 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	PDZD8	Q8NEN9	1154 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TRMT61A	Q96FX7	289 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	OR2A14	Q96R47	310 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	YME1L1	Q96TA2	773 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	NIPSNAP1	Q9BPW8	284 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SYT17	Q9BSW7	474 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TBCD	Q9BTW9	1192 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ING2	Q9H160	280 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ADNP	Q9H2P0	1102 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZFP14	Q9HCL3	533 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	PCDH12	Q9NPG4	1184 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	C1GALT1	Q9NS00	363 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	FAM120C	Q9NX05	1096 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	THUMPD1	Q9NXG2	353 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	DAPK2	Q9UIK4	370 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	POU2F3	Q9UKI9	436 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	MKLN1	Q9UL63	735 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms