RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ACTL8Q9H568 366 aa12.41□□□□□ -0.42
TRAPPC4-212ENST00000533058 ZNF358Q9NW07 568 aa12.41□□□□□ -0.42
TRAPPC4-212ENST00000533058 CPSF2Q9P2I0 782 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-212ENST00000533058 TAC3Q9UHF0 121 aa12.41□□□□□ -0.42
TRAPPC4-212ENST00000533058 LGALS13Q9UHV8 139 aa12.41□□□□□ -0.42
TRAPPC4-212ENST00000533058 SRPK3Q9UPE1 567 aa12.41□□□□□ -0.42
TRAPPC4-212ENST00000533058 POLHQ9Y253 713 aa12.41□□□□□ -0.42
TRAPPC4-212ENST00000533058 A0A1W2PPV9 198 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 E7ENX8 843 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 UBXN8O00124 270 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 COPEO14579 308 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 HCRTR1O43613 425 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 SMIM24O75264 130 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CCNDBP1O95273 360 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CAPN1P07384 714 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CD63P08962 238 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 FAM87AP0C7U9 286 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 MYZAPP0CAP1 466 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 PRKAR1AP10644 381 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 GFAPP14136 432 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 KRT4P19013 534 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 AGXTP21549 392 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CMPK1P30085 196 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 GRIA3P42263 894 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 GCGRP47871 477 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CSRP3P50461 194 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 POLE2P56282 527 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 TBPL1P62380 186 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CDKL1Q00532 357 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 TAP2Q03519 686 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 COL9A2Q14055 689 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 ERV3-1Q14264 604 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 YOD1Q5VVQ6 348 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 PRAMEF13Q5VWM6 474 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CAPN13Q6MZZ7 669 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 C16orf46Q6P387 395 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 FIGLAQ6QHK4 219 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 HDXQ7Z353 690 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 FAM20CQ8IXL6 584 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 TCAIMQ8N3R3 496 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CCDC63Q8NA47 563 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 MZB1Q8WU39 189 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 THAP4Q8WY91 577 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 SLC25A18Q9H1K4 315 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 MRPS30Q9NP92 439 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 EURLQ9NYK6 297 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 NUDT4Q9NZJ9 180 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 DCDC2Q9UHG0 476 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 KCNMB2Q9Y691 235 aa12.4□□□□□ -0.42
TRAPPC4-212ENST00000533058 CCDC189A1A4V9 331 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 ZSCAN9O15535 394 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SRPX2O60687 465 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 GLRA3O75311 464 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 ONECUT2O95948 504 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 GSTA1P08263 222 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SPTBP11277 2137 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 H2AFXP16104 143 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 TAC1P20366 129 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 CCND1P24385 295 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 KCNC1P48547 511 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 CCT5P48643 541 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 HNMTP50135 292 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 ARSFP54793 590 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 RELAQ04206 551 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 KCNAB2Q13303 367 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 DEFB109BQ30KR1 87 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 C18orf21Q32NC0 220 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 FBXO48Q5FWF7 155 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 TECRLQ5HYJ1 363 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 TCTE1Q5JU00 501 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 FCRL6Q6DN72 434 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SULT1C3Q6IMI6 304 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 FAM198BQ6UWH4 519 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 ADCK2Q7Z695 626 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 ZNF605Q86T29 641 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 LCA5Q86VQ0 697 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 MCATQ8IVS2 390 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 APLFQ8IW19 511 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SNX31Q8N9S9 440 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 OR2L3Q8NG85 312 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 RHEBL1Q8TAI7 183 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 PYCR2Q96C36 320 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 RHBDF1Q96CC6 855 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 RNF31Q96EP0 1072 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 GPR78Q96P69 363 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 GBP5Q96PP8 586 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SMC6Q96SB8 1091 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 ATOH8Q96SQ7 321 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 MRPL57Q9BQC6 102 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SLC7A5P2Q9GIP4 190 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SPRTNQ9H040 489 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 PCBD2Q9H0N5 130 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 STMN4Q9H169 189 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 MRPL46Q9H2W6 279 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 CNOT10Q9H9A5 744 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 ANKMY1Q9P2S6 941 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 XPR1Q9UBH6 696 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 TCFL5Q9UL49 500 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 KLHL20Q9Y2M5 609 aa12.39□□□□□ -0.43
TRAPPC4-212ENST00000533058 SPTA1P02549 2419 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms