RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
TRIM53BP-201ENST00000532912 HSPE1-MOB4S4R3N1 261 aa8.01□□□□□ -1.13
TRIM53BP-201ENST00000532912 GABRR3A8MPY1 467 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 TTC34A8MYJ7 566 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 QSOX1O00391 747 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SPINT1O43278 529 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 JRKO75564 520 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 GCM2O75603 506 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 EPN2O95208 641 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ZNF682O95780 498 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 COX7A2P14406 83 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 FPR1P21462 350 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 DNAJA1P31689 397 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 MMP12P39900 470 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 BDKRB1P46663 353 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 PREPP48147 710 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 MVDP53602 400 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 MAPK10P53779 464 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ITGA1P56199 1179 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CXCR4P61073 352 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SLC35A2P78381 396 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 GAB1Q13480 694 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 NAE1Q13564 534 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 LAPTM4AQ15012 233 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SF1Q15637 639 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CTF1Q16619 201 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ARSIQ5FYB1 569 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 LY6G5CQ5SRR4 150 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 DUS1LQ6P1R4 473 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 FAHD1Q6P587 224 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 B3GNT8Q7Z7M8 397 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 GALNT10Q86SR1 603 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 NLRP8Q86W28 1048 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ANKRD13BQ86YJ7 626 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CCDC71Q8IV32 467 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 RAVER1Q8IY67 606 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ZNF557Q8N988 423 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 PUM2Q8TB72 1066 aaKnown RBP eCLIP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CNIH3Q8TBE1 160 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ZFP90Q8TF47 636 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CYB5D2Q8WUJ1 264 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 FAR1Q8WVX9 515 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ATL1Q8WXF7 558 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SORCS1Q8WY21 1168 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CLP1Q92989 425 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 GLYATL1Q969I3 302 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 BORCS5Q969J3 196 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 COQ8BQ96D53 544 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 THAP11Q96EK4 314 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 HSH2DQ96JZ2 352 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 C7orf34Q96L11 122 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SAMD11Q96NU1 681 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SIGLEC11Q96RL6 698 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 MTERF1Q99551 399 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 PKP4Q99569 1192 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 PITX2Q99697 317 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 DPH2Q9BQC3 489 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 DUSP26Q9BV47 211 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 FUNDC2Q9BWH2 189 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SPATA9Q9BWV2 254 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ASPSCR1Q9BZE9 553 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 RNF208Q9H0X6 261 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 MTG2Q9H4K7 406 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 TPT1P8Q9HAU6 139 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 RAD18Q9NS91 495 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SIRT5Q9NXA8 310 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 DKK3Q9UBP4 350 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 RPS6KA6Q9UK32 745 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 NDRG4Q9ULP0 352 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 IRAK3Q9Y616 596 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 PRRC2BQ5JSZ5 2229 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 PCM1Q15154 2024 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 PABPN1LA6NDY0 278 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 MAGEB3O15480 346 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 XPNPEP2O43895 674 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 LILRB5O75023 590 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 UGT2B11O75310 529 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 BCAS1O75363 584 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 KLHL18O94889 574 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 INMTO95050 263 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 DIRAS1O95057 198 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CXCL14O95715 111 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SLC16A8O95907 504 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SOD1P00441 154 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 FABP3P05413 133 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ADH1AP07327 375 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CLTBP09497 229 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 NUDT7P0C024 238 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 CSF2RAP15509 400 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SYN1P17600 705 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 IDSP22304 550 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 MAP4P27816 1152 aaKnown RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 BMXP51813 675 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 TPD52P55327 224 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 KCNJ10P78508 379 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 HTRA4P83105 476 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 EMX1Q04741 257 aaPredicted RBP8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ACSM2AQ08AH3 577 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 SPCS2Q15005 226 aa8□□□□□ -1.13
TRIM53BP-201ENST00000532912 ACOX1Q15067 660 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms