RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RAB6CQ53S08 254 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RABL3Q5HYI8 236 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 NDUFAF5Q5TEU4 345 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SPRED1Q7Z699 444 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 LINC01465Q8N7H1 131 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 C9orf43Q8TAL5 461 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 KHSRPQ92945 711 aaKnown RBP eCLIP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 UROC1Q96N76 676 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 STRA6Q9BX79 667 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 DUSP16Q9BY84 665 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RAB6CQ9H0N0 254 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 FOLH1BQ9HBA9 442 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ZBTB20Q9HC78 741 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CFAP97Q9P2B7 532 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 NDRG2Q9UN36 371 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PPIEQ9UNP9 301 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CLCA2Q9UQC9 943 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 STYXL1Q9Y6J8 313 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TRAV20A0A0B4J274 112 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 MTMR11A4FU01 709 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 KRBOX1C9JBD0 128 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 L7N2F9 121 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 EEF2KO00418 725 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CASKO14936 926 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 KIAA0355O15063 1070 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SHOXO15266 292 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TGM5O43548 720 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RASGRP1O95267 797 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 JUNP05412 331 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ATP5C1P36542 298 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 VIPR2P41587 438 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CCR10P46092 362 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNQ1P51787 676 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RGS1Q08116 209 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 HECTD3Q5T447 861 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 BRAT1Q6PJG6 821 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 NAPRTQ6XQN6 538 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CLEC20AQ6ZU45 233 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RETREG3Q86VR2 466 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 OR7G3Q8NG95 312 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 OR6C4Q8NGE1 309 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 LMO3Q8TAP4 145 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SPPL2AQ8TCT8 520 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC9A6Q92581 669 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RBPMSQ93062 196 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ALG9Q9H6U8 611 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 MCUBQ9NWR8 336 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 NKIRAS2Q9NYR9 191 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 AASSQ9UDR5 926 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 KLHL21Q9UJP4 597 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PCDHB8Q9UN66 801 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CMAHPQ9Y471 501 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ELOVL7A1L3X0 281 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TBC1D3BA6NDS4 549 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 C2orf74A8MZ97 194 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 NME4O00746 187 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PRMT5O14744 637 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SCELO95171 688 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 DNTTP04053 509 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SOD2P04179 222 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 LCKP06239 509 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 GZMKP49863 264 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 POLR2JP52435 117 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ERVK-21P61565 698 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 GRK1Q15835 563 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 USF2Q15853 346 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 MAPKAPK3Q16644 382 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF549Q6P9A3 640 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF613Q6PF04 617 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RSPO2Q6UXX9 243 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 DEF8Q6ZN54 512 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PRSS42Q7Z5A4 293 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SPATA19Q7Z5L4 167 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PSTKQ8IV42 348 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PLD6Q8N2A8 252 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PTGR2Q8N8N7 351 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TXNDC5Q8NBS9 432 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CMASQ8NFW8 434 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TTLQ8NG68 377 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 C1GALT1C1Q96EU7 318 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SCRN2Q96FV2 425 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF578Q96N58 590 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 NECTIN4Q96NY8 510 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 COL21A1Q96P44 957 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SMOQ99835 787 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 ASPNQ9BXN1 380 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TEX12Q9BXU0 123 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 HDHD5Q9BXW7 423 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 TM6SF2Q9BZW4 377 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC6A17Q9H1V8 727 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PRMT8Q9NR22 394 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 MED11Q9P086 117 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 NLKQ9UBE8 527 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 COMMD3Q9UBI1 195 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 RNF112Q9ULX5 631 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 MAFFQ9ULX9 164 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 CNTN6Q9UQ52 1028 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 YBX2Q9Y2T7 364 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 PRELID3BQ9Y3B1 194 aa6.6□□□□□ -1.35
TGFBR3-209ENST00000532540 HCFC2Q9Y5Z7 792 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms