RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 ZNF781Q8N8C0 355 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 OR4K1Q8NGD4 311 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 MTFMTQ96DP5 389 aaKnown RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 TCTN2Q96GX1 697 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 SORT1Q99523 831 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 ILKAPQ9H0C8 392 aaPredicted RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 FAM60AQ9NP50 221 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 ZDHHC2Q9UIJ5 367 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 CFAP54Q96N23 3096 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 OR2A25A4D2G3 310 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 SNNO75324 88 aaPredicted RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 KITP10721 976 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 SERPINB3P29508 390 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 HSD11B2P80365 405 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 GALNT1Q10472 559 aaPredicted RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 DDX39BQ13838 428 aaKnown RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 KCNAB1Q14722 419 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 ZRSR2Q15696 482 aaKnown RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 SGO1Q5FBB7 561 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 MED27Q6P2C8 311 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 TMIGD1Q6UXZ0 262 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 SLITRK4Q8IW52 837 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 TBC1D19Q8N5T2 526 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 L3MBTL4Q8NA19 623 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 N4BP2L2Q92802 583 aaPredicted RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 GRAMD1AQ96CP6 724 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 ANKMY1Q9P2S6 941 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 MARCOQ9UEW3 520 aaPredicted RBP16.93■□□□□ 0.3
CTSB-222ENST00000531551 TRPS1Q9UHF7 1281 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 RAP2CQ9Y3L5 183 aa16.93■□□□□ 0.3
CTSB-222ENST00000531551 TMEM233B4DJY2 109 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 AZIN1O14977 448 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 TOX3O15405 576 aaPredicted RBP16.92■□□□□ 0.3
CTSB-222ENST00000531551 LCMT2O60294 686 aaKnown RBP16.92■□□□□ 0.3
CTSB-222ENST00000531551 CTSVO60911 334 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 SERPIND1P05546 499 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 CASP2P42575 452 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 INHBCP55103 352 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 CYP4F2P78329 520 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 REEP5Q00765 189 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 TCHHL1Q5QJ38 904 aaPredicted RBP16.92■□□□□ 0.3
CTSB-222ENST00000531551 FBXO42Q6P3S6 717 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 CARFQ8N187 725 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 WDR34Q96EX3 536 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 MAGEB10Q96LZ2 347 aaPredicted RBP16.92■□□□□ 0.3
CTSB-222ENST00000531551 TMEM74Q96NL1 305 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 ZNF768Q9H5H4 540 aaKnown RBP16.92■□□□□ 0.3
CTSB-222ENST00000531551 ELOVL6Q9H5J4 265 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 PNPOQ9NVS9 261 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 PDP2Q9P2J9 529 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 TRAF6Q9Y4K3 522 aa16.92■□□□□ 0.3
CTSB-222ENST00000531551 DCDC2BA2VCK2 349 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 KCNK5O95279 499 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 STATHP02808 62 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 VIMP08670 466 aaKnown RBP16.91■□□□□ 0.3
CTSB-222ENST00000531551 EZRP15311 586 aaKnown RBP16.91■□□□□ 0.3
CTSB-222ENST00000531551 BCL6P41182 706 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 NEK2P51955 445 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 OCRLQ01968 901 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 PCDH1Q08174 1060 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 TMTC4Q5T4D3 741 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 HES3Q5TGS1 186 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 ARHGAP22Q7Z5H3 698 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 CRLF3Q8IUI8 442 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 CLYBLQ8N0X4 340 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 KLHL6Q8WZ60 621 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 CCT6BQ92526 530 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 ZFYVE21Q9BQ24 234 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 IRAK4Q9NWZ3 460 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 ZNF490Q9ULM2 529 aaPredicted RBP16.91■□□□□ 0.3
CTSB-222ENST00000531551 PCDHGA11Q9Y5H2 935 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 KLK4Q9Y5K2 254 aa16.91■□□□□ 0.3
CTSB-222ENST00000531551 TRBC2A0A5B9 178 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 HGSO14964 777 aaPredicted RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 MT-CO3P00414 261 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 EIF2S1P05198 315 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 ENO1P06733 434 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 CDK4P11802 303 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 NELFEP18615 380 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 CSTF2P33240 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
CTSB-222ENST00000531551 RPL14P50914 215 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 PDX1P52945 283 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 RPS15AP62244 130 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 GNGT1P63211 74 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 ZFP36L1Q07352 338 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 IFT88Q13099 833 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 GGTA1PQ4G0N0 100 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 ADNP2Q6IQ32 1131 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SCIMPQ6UWF3 145 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 KMT5CQ86Y97 462 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 OR7G3Q8NG95 312 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 UBE2E3Q969T4 207 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 HBEGFQ99075 208 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 RTKNQ9BST9 563 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SNX6Q9UNH7 406 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 KCNE1BA0A087WTH5 132 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 ANKDD1BA6NHY2 528 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 HCRTR1O43613 425 aa16.9■□□□□ 0.3
CTSB-222ENST00000531551 SNUPNO95149 360 aaKnown RBP16.9■□□□□ 0.3
CTSB-222ENST00000531551 ANKRD34CP0C6C1 535 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms