RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 OR56A3Q8NH54 315 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ZFP28Q8NHY6 868 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 HM13Q8TCT9 377 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 SKA2Q8WVK7 121 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 CANT1Q8WVQ1 401 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 GTF2H4Q92759 462 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 CCDC74AQ96AQ1 378 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 VPS33AQ96AX1 596 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 SLCO4A1Q96BD0 722 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 WDR34Q96EX3 536 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TEX37Q96LM6 180 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ASB16Q96NS5 453 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PRPF18Q99633 342 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 LBHD1Q9BQE6 289 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 SLC39A3Q9BRY0 314 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 EFCAB11Q9BUY7 163 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 C1orf50Q9BV19 199 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RIOK2Q9BVS4 552 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 HDAC8Q9BY41 377 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ACPTQ9BZG2 426 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PITHD1Q9GZP4 211 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 PCDHAC1Q9H158 963 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ABCG8Q9H221 673 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LINC00597Q9H2U6 94 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ACTL8Q9H568 366 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 FBRSQ9HAH7 460 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 DYRK4Q9NR20 520 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PNPLA3Q9NST1 481 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 OLAHQ9NV23 265 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 FAM120CQ9NX05 1096 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 TUBA8Q9NY65 449 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 GIMAP2Q9UG22 337 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ZNF639Q9UID6 485 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TMPRSS11EQ9UL52 423 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 WBP11Q9Y2W2 641 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 RNF11Q9Y3C5 154 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 HCFC2Q9Y5Z7 792 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 KCNE2Q9Y6J6 123 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ANKRD12Q6UB98 2062 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 KIAA0100Q14667 2235 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 TRBV5-3A0A0A0MS03 114 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 A0A0U1RQS6 177 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 VGLL3A8MV65 326 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 EVPLLA8MZ36 301 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 H0YAE9 185 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 FOXE1O00358 373 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 KPNA3O00505 521 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 GSTA4O15217 222 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 INPP4BO15327 924 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 TSPAN6O43657 245 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 KCNJ13O60928 360 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RASAL1O95294 804 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CLPTM1O96005 669 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 PDYNP01213 254 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CTSLP07711 333 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 LINGO3P0C6S8 592 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 UBTFL6P0CB48 400 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 ZCCHC18P0CG32 403 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 EPORP19235 508 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 IL12AP29459 219 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 TTKP33981 857 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CA5AP35218 305 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CD96P40200 585 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ETV3P41162 512 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 HALP42357 657 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 KIR3DL1P43629 444 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 GSTM5P46439 218 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RXRGP48443 463 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ERFP50548 548 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CCT8P50990 548 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RPS6KA3P51812 740 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 NR1H2P55055 460 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 PRKCQQ04759 706 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CHRNB3Q05901 458 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CYP4F3Q08477 520 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ACSM2AQ08AH3 577 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ABHD18Q0P651 414 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 TMEM115Q12893 351 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 MTAPQ13126 283 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CHIT1Q13231 466 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 GPM6BQ13491 265 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CAMK1Q14012 370 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CAPRIN1Q14444 709 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 ARHGAP19Q14CB8 494 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ACOX1Q15067 660 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 HIST2H2ACQ16777 129 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 DUSP6Q16828 381 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RFX4Q33E94 735 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 FAM174BQ3ZCQ3 159 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 KCTD21Q4G0X4 260 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ZNF658BQ4V348 819 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 LIN52Q52LA3 116 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 FNDC3BQ53EP0 1204 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 RUNDC3AQ59EK9 446 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 FBXO48Q5FWF7 155 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RABL3Q5HYI8 236 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 C9orf64Q5T6V5 341 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ANXA8L1Q5VT79 327 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ACSM2BQ68CK6 577 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 HIST2H2AA3Q6FI13 130 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms