RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 APOLD1Q96LR9 279 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ZNF347Q96SE7 839 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 CPXM1Q96SM3 734 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 HDHD5Q9BXW7 423 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 CLPBQ9H078 707 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 TKTL2Q9H0I9 626 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ABCG4Q9H172 646 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 POLR1BQ9H9Y6 1135 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 FZD3Q9NPG1 666 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 G6PC2Q9NQR9 355 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 THSD1Q9NS62 852 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 TMEM160Q9NX00 188 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 NCKIPSDQ9NZQ3 722 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 IL36AQ9UHA7 158 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 STAP1Q9ULZ2 295 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 OR51B4Q9Y5P0 310 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 LRRK2Q5S007 2527 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ATMQ13315 3056 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 A6NCN8 305 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 BECN2A8MW95 431 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ADAM10O14672 748 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 DSCR3O14972 297 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SCAMP1O15126 338 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 TP73O15350 636 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SNAP91O60641 907 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 USP12O75317 370 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 CSO75390 466 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ADCY5O95622 1261 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 F9P00740 461 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 RRM1P23921 792 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 RABIFP47224 123 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SOX2P48431 317 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SULT1E1P49888 294 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 NAP1L1P55209 391 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 CLDN2P57739 230 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 RPS21P63220 83 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ARL13AQ5H913 290 aaPredicted RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SEL1L3Q68CR1 1132 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 KIAA1161Q6NSJ0 714 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 GBP6Q6ZN66 633 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 GCNT7Q6ZNI0 430 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 Q6ZSR6 202 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SLC26A9Q7LBE3 791 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 PARGQ86W56 976 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ZDHHC17Q8IUH5 632 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 GALNT16Q8N428 558 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 WDTC1Q8N5D0 677 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ZNF397Q8NF99 534 aaPredicted RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 CEP70Q8NHQ1 597 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 KCNE4Q8WWG9 221 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SHC3Q92529 594 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 CENPIQ92674 756 aaPredicted RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 KCNJ9Q92806 393 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 NAF1Q96HR8 494 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 FEM1CQ96JP0 617 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 PSMB7Q99436 277 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 CRACR2AQ9BSW2 395 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 NOD2Q9HC29 1040 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ACP6Q9NPH0 428 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 PIGVQ9NUD9 493 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 ARHGEF38Q9NXL2 777 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 IPO11Q9UI26 975 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 CSNK1G3Q9Y6M4 447 aa5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 SPTBN1Q01082 2364 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 NYNRINQ9P2P1 1898 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 UBR5O95071 2799 aaPredicted RBP5.05□□□□□ -1.6
AMBRA1-209ENST00000529963 A0A087X0M5 115 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 A0A0D9SEW6 157 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 A0A1B0GX30 115 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 ILVBLA1L0T0 632 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 GTPBP10A4D1E9 387 aaKnown RBP5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 STX16-NPEPL1H3BU86 382 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 K7ERQ8 282 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 STX16O14662 325 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 FPGTO14772 594 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 KLK10O43240 276 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 AQP9O43315 295 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 SMAD6O43541 496 aaKnown RBP5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 CSF2P04141 144 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 CELA2AP08217 269 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 CSF1P09603 554 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 GIMD1P0DJR0 217 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 ACP5P13686 325 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 ADRB3P13945 408 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 IGFBP2P18065 325 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 ATP5F1P24539 256 aaPredicted RBP5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 RBMS1P29558 406 aaKnown RBP5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 OR1E1P30953 314 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 CXCR3P49682 368 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 DNA2P51530 1060 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 CLNS1AP54105 237 aaKnown RBP5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 CDK18Q07002 472 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 SLC20A2Q08357 652 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 SGCGQ13326 291 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 CDKN3Q16667 212 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 EXOC3L4Q17RC7 722 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 TBRG1Q3YBR2 411 aa5.04□□□□□ -1.6
AMBRA1-209ENST00000529963 PTPN20Q4JDL3 420 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms