RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	TCF7L2	Q9NQB0	619 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	OR6C3	Q9NZP0	311 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	LARS	Q9P2J5	1176 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	SLC24A2	Q9UI40	661 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	LSM4	Q9Y4Z0	139 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	CLIC4	Q9Y696	253 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	UTY	O14607	1347 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	FEZF1	A0PJY2	475 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	XKRY2	A2RUG3	117 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	ZSCAN5B	A6NJL1	495 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SDR42E2	A6NKP2	422 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	HSPB2	A8KAH6	182 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	KLRF2	D3W0D1	207 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	E2F3	O00716	465 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	MTX2	O75431	263 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	GLCE	O94923	617 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	EPN2	O95208	641 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	KRT6B	P04259	564 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	PCCA	P05165	728 aa	Predicted RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	RFPL3S	P0C7P2	107 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	CETP	P11597	493 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	VPREB1	P12018	145 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	GJA1	P17302	382 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	PTPN4	P29074	926 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SHMT1	P34896	483 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	KRT6C	P48668	564 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	PRMT2	P55345	433 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	TPTE	P56180	551 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	RIPK4	P57078	832 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SRP54	P61011	504 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SIRPA	P78324	504 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	MRPS34	P82930	218 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	PSG6	Q00889	435 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	E2F1	Q01094	437 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SCGB2A2	Q13296	93 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	LPIN1	Q14693	890 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	ARHGEF6	Q15052	776 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	HSPB2	Q16082	182 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	CCDC152	Q4G0S7	254 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	FAM98B	Q52LJ0	330 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	LRRC23	Q53EV4	343 aa	Predicted RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	C6orf141	Q5SZD1	244 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	ATAD3B	Q5T9A4	648 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	CASC4	Q6P4E1	433 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	MACC1	Q6ZN28	852 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	PIGW	Q7Z7B1	504 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	HAPLN4	Q86UW8	402 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	EXOC3L1	Q86VI1	746 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SLC35F3	Q8IY50	421 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	CFAP206	Q8IYR0	622 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	CADM3	Q8N126	398 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	OR52K1	Q8NGK4	314 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	OR2T34	Q8NGX1	318 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	OR8K5	Q8NH50	307 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	NCOA7	Q8NI08	942 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	AGR3	Q8TD06	166 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	ASB5	Q8WWX0	329 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	AP2M1	Q96CW1	435 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	CCDC51	Q96ER9	411 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SGF29	Q96ES7	293 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	NSMCE2	Q96MF7	247 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	RBM14	Q96PK6	669 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	ZSCAN5A	Q9BUG6	496 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	TFB2M	Q9H5Q4	396 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	ECT2	Q9H8V3	914 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	EQTN	Q9NQ60	294 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	HOMER3	Q9NSC5	361 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	TAS2R14	Q9NYV8	317 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	GRHL1	Q9NZI5	618 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	FBXO4	Q9UKT5	387 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	SLC8A2	Q9UPR5	921 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	ITM2B	Q9Y287	266 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	MED23	Q9ULK4	1368 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	DDX60	Q8IY21	1712 aa	Known RBP	4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	MUC6	Q6W4X9	2439 aa		4.12	□□□□□ -1.75
PCM1-223	ENST00000524356	C13orf42	A0A1B0GVH6	325 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	MAGEA13P	A6NCF6	341 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	ARHGAP42	A6NI28	874 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356		H0YIV9	168 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	AP4M1	O00189	453 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	CTDSPL	O15194	276 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	LINC01565	O15544	149 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	NUDT21	O43809	227 aa	Known RBP	4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	LANCL1	O43813	399 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	TMPRSS11D	O60235	418 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	ZNF821	O75541	412 aa	Predicted RBP	4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	SCGB2A1	O75556	95 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	SLITRK3	O94933	977 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	OR6B1	O95007	311 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	MOCS3	O95396	460 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	VNN2	O95498	520 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	CGA	P01215	116 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	IL1A	P01583	271 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	HIST1H2AB	P04908	130 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	PCCB	P05166	539 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	KRT8	P05787	483 aa		4.11	□□□□□ -1.75
PCM1-223	ENST00000524356	RHOXF2B	P0C7M4	288 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms