RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	DNAJC16	Q9Y2G8	782 aa		4.99	□□□□□ -1.61
PABPC1-223	ENST00000523636	MTO1	Q9Y2Z2	717 aa	Known RBP	4.99	□□□□□ -1.61
PABPC1-223	ENST00000523636	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
PABPC1-223	ENST00000523636	DUSP10	Q9Y6W6	482 aa		4.99	□□□□□ -1.61
PABPC1-223	ENST00000523636	DNAH1	Q9P2D7	4330 aa		4.99	□□□□□ -1.61
PABPC1-223	ENST00000523636	TRAV6	A0A075B6T7	132 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636		A0A087WWV3	80 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	LOC100653049	A0A140TA62	436 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	VWA3A	A6NCI4	1184 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	E2F3	O00716	465 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	COCH	O43405	550 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ATP8B1	O43520	1251 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	HCRT	O43612	131 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	GPRIN2	O60269	458 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	CDC14B	O60729	498 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	KCNJ13	O60928	360 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	KRT34	O76011	436 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TDP2	O95551	362 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	DIRAS3	O95661	229 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	LY6G6D	O95868	133 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TUBB	P07437	444 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	FGF4	P08620	206 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TROVE2	P10155	538 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	NPPB	P16860	134 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PTPN3	P26045	913 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ALDH4A1	P30038	563 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PSMC2	P35998	433 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	LONP1	P36776	959 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PPP1R2	P41236	205 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	GZMK	P49863	264 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PLTP	P55058	493 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ADAR	P55265	1226 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	CDH8	P55286	799 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PER3	P56645	1201 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	CCL7	P80098	99 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PMP22	Q01453	160 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	SCN1B	Q07699	218 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	IL24	Q13007	206 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	GPS1	Q13098	491 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	STIM1	Q13586	685 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	LAMB3	Q13751	1172 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	SQLE	Q14534	574 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PFKFB3	Q16875	520 aa	Predicted RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	KCTD21	Q4G0X4	260 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TDRD12	Q587J7	1177 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ETFRF1	Q6IPR1	90 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PAPD4	Q6PIY7	484 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TMEM270	Q6UE05	265 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TPGS1	Q6ZTW0	290 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TAF8	Q7Z7C8	310 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	RFX6	Q8HWS3	928 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PSTK	Q8IV42	348 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	RHOT1	Q8IXI2	618 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	GPR135	Q8IZ08	494 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TRIM58	Q8NG06	486 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	OR2T34	Q8NGX1	318 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	NFKBID	Q8NI38	313 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	GOLGA5	Q8TBA6	731 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	STARD8	Q92502	1023 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	SYN2	Q92777	582 aa	Predicted RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	SIKE1	Q9BRV8	207 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	NAA11	Q9BSU3	229 aa	Predicted RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	FUZ	Q9BT04	418 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	BBS2	Q9BXC9	721 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	NSRP1	Q9H0G5	558 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	CARD9	Q9H257	536 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	C12orf65	Q9H3J6	166 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ZCCHC4	Q9H5U6	513 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	STN1	Q9H668	368 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	SARS2	Q9NP81	518 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PRSS16	Q9NQE7	514 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	PFDN4	Q9NQP4	134 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	G6PC2	Q9NQR9	355 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	ABCB8	Q9NUT2	735 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	TMEM140	Q9NV12	185 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	BARHL2	Q9NY43	387 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	MAN1B1	Q9UKM7	699 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	KCNJ14	Q9UNX9	436 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	CHKB	Q9Y259	395 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	SLC27A6	Q9Y2P4	619 aa		4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636	INTS1	Q8N201	2190 aa	Known RBP	4.98	□□□□□ -1.61
PABPC1-223	ENST00000523636		A0A1W2PRX2	142 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	UBE2QL1	A1L167	161 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	ZSCAN5B	A6NJL1	495 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	GLOD5	A6NK44	160 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	OR6C76	A6NM76	312 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	EFCAB8	A8MWE9	144 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	INAFM1	C9JVW0	142 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	STX16-NPEPL1	H3BU86	382 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	PSMD9	O00233	223 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	STX16	O14662	325 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	ANGPT2	O15123	496 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	T	O15178	435 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	MID1	O15344	667 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	TEX33	O43247	280 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	TGFB1I1	O43294	461 aa		4.97	□□□□□ -1.61
PABPC1-223	ENST00000523636	BUB1	O43683	1085 aa		4.97	□□□□□ -1.61

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