RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PGGT1BP53609 377 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 AP1S2P56377 157 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 RPS15AP62244 130 aaKnown RBP16.22■□□□□ 0.19
SQLE-205ENST00000521232 CSNK1G2P78368 415 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 MRPS25P82663 173 aaKnown RBP16.22■□□□□ 0.19
SQLE-205ENST00000521232 NAE1Q13564 534 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 DSG2Q14126 1118 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 VWA2Q5GFL6 755 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 LCTLQ6UWM7 567 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 TMEM207Q6UWW9 146 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 SLC26A11Q86WA9 606 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 ZC3HC1Q86WB0 502 aaKnown RBP16.22■□□□□ 0.19
SQLE-205ENST00000521232 THAP11Q96EK4 314 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 VPS50Q96JG6 964 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 CRB3Q9BUF7 120 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 TRIM54Q9BYV2 358 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 WHRNQ9P202 907 aa16.22■□□□□ 0.19
SQLE-205ENST00000521232 PTPN13Q12923 2485 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 IPO13O94829 963 aaKnown RBP16.21■□□□□ 0.19
SQLE-205ENST00000521232 ALPPP05187 535 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 ENO2P09104 434 aaPredicted RBP16.21■□□□□ 0.19
SQLE-205ENST00000521232 CASQ1P31415 396 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 ETF1P62495 437 aaKnown RBP16.21■□□□□ 0.19
SQLE-205ENST00000521232 RBBP7Q16576 425 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 ATG9BQ674R7 924 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 DUPD1Q68J44 220 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 VN1R4Q7Z5H5 301 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 STRA8Q7Z7C7 330 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 LAPTM4BQ86VI4 370 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 C17orf64Q86WR6 236 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 ZBED8Q8IZ13 594 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 AMER3Q8N944 861 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 Q8NA96 180 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 OR11G2Q8NGC1 345 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 OR56A3Q8NH54 315 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 CPT1CQ8TCG5 803 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 ANKRD7Q92527 254 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 PNPLA2Q96AD5 504 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 TM4SF19Q96DZ7 209 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 MMABQ96EY8 250 aaPredicted RBP16.21■□□□□ 0.19
SQLE-205ENST00000521232 MCMBPQ9BTE3 642 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 MFRPQ9BY79 579 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 TGIF2Q9GZN2 237 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 DRC3Q9H069 523 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 ARL15Q9NXU5 204 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 SH2B3Q9UQQ2 575 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 MAP4K5Q9Y4K4 846 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 SHANK1Q9Y566 2161 aa16.21■□□□□ 0.19
SQLE-205ENST00000521232 RAD51CO43502 376 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 CALCOCO2Q13137 446 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 NDUFA9Q16795 377 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 TUBB8Q3ZCM7 444 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 SLC6A19Q695T7 634 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 CAPN13Q6MZZ7 669 aaPredicted RBP16.2■□□□□ 0.18
SQLE-205ENST00000521232 ATCAYQ86WG3 371 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 PYROXD1Q8WU10 500 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 ATL1Q8WXF7 558 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 FBXL8Q96CD0 374 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 HAUS8Q9BT25 410 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 FAM129AQ9BZQ8 928 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 MKKSQ9NPJ1 570 aaPredicted RBP16.2■□□□□ 0.18
SQLE-205ENST00000521232 NSMCE4AQ9NXX6 385 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 TRPC4Q9UBN4 977 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 C3orf18Q9UK00 162 aa16.2■□□□□ 0.18
SQLE-205ENST00000521232 NOVA2Q9UNW9 492 aaKnown RBP16.2■□□□□ 0.18
SQLE-205ENST00000521232 USP9XQ93008 2570 aaPredicted RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 A0A0A6YYC8 382 aaPredicted RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 PABPN1LA6NDY0 278 aaKnown RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 I3L1I5 382 aaPredicted RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 EIF3HO15372 352 aaKnown RBP eCLIP16.19■□□□□ 0.181e-6■■□□□ 13.6
SQLE-205ENST00000521232 LCMT2O60294 686 aaKnown RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 ANXA5P08758 320 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 ZNF37AP17032 561 aaPredicted RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 ITGA3P26006 1051 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 EMP2P54851 167 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 TAS2R39P59534 338 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 ILF2Q12905 390 aaKnown RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 SBSNQ6UWP8 590 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 CYS1Q717R9 158 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 PRSS58Q8IYP2 241 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 C17orf53Q8N3J3 647 aaPredicted RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 NKAPQ8N5F7 415 aaKnown RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 ABHD11Q8NFV4 315 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 OR4K1Q8NGD4 311 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 ALKBH8Q96BT7 664 aaKnown RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 MESP1Q9BRJ9 268 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 SARGQ9BW04 601 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 YIPF2Q9BWQ6 316 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 DPH5Q9H2P9 285 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 SLAMF7Q9NQ25 335 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 SMYD2Q9NRG4 433 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 C14orf105Q9NVL8 296 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 GRHL1Q9NZI5 618 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 IKZF3Q9UKT9 509 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 MRPS2Q9Y399 296 aaKnown RBP16.19■□□□□ 0.18
SQLE-205ENST00000521232 SCN3AQ9NY46 2000 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 DOPEY2Q9Y3R5 2298 aa16.19■□□□□ 0.18
SQLE-205ENST00000521232 FAM95CA0A1B0GW59 222 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 A0A1W2PQ72 361 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 FEZF1A0PJY2 475 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms