RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ADRA2CP18825 462 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 ELAVL4P26378 380 aaKnown RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 PSMB4P28070 264 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 SSTR1P30872 391 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 CLK1P49759 484 aaKnown RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 GMPSP49915 693 aaPredicted RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 NAGLUP54802 743 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 PTENP60484 403 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 IRX1P78414 480 aaPredicted RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 WLSQ5T9L3 541 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 SUSD4Q5VX71 490 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 FUT10Q6P4F1 479 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 TMEM182Q6ZP80 229 aaPredicted RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 SLC24A5Q71RS6 500 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 FCRLAQ7L513 359 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 KLHL7Q8IXQ5 586 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 TIGD4Q8IY51 512 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 RCOR2Q8IZ40 523 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 SIX6OS1Q8N1H7 587 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 GBP7Q8N8V2 638 aaPredicted RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 OCC1Q8TAD7 63 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 DEPDC1BQ8WUY9 529 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 CDK19Q9BWU1 502 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 MINDY3Q9H8M7 445 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 GRPEL1Q9HAV7 217 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 PHPT1Q9NRX4 125 aaPredicted RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 MRGBPQ9NV56 204 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 PANK4Q9NVE7 773 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 BARHL2Q9NY43 387 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 GMEB2Q9UKD1 530 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 RUVBL2Q9Y230 463 aaKnown RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 HEG1Q9ULI3 1381 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 IGLV7-46A0A075B6I9 117 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 C15orf61A6NNL5 157 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 F8VVB4 439 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 F8VWA3 439 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 ARHGEF9O43307 516 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 VTNP04004 478 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 TYMPP19971 482 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 SCN1BQ07699 218 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 DRP2Q13474 957 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 CDH18Q13634 790 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 ZC2HC1BQ5TFG8 222 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 OR4C11Q6IEV9 310 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 FAM166AQ6J272 317 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 ZNF614Q8N883 585 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 TCEANCQ8N8B7 351 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 GATAD1Q8WUU5 269 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 P2RX5Q93086 422 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 AK8Q96MA6 479 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 GDAP1L1Q96MZ0 367 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
SKP1-208ENST00000521216 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.45□□□□□ -1.7
SKP1-208ENST00000521216 ERAP1Q9NZ08 941 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 PRDM4Q9UKN5 801 aa4.45□□□□□ -1.7
SKP1-208ENST00000521216 H0YAE9 185 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 FLRT2O43155 660 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 FCGR3BO75015 233 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 CGAP01215 116 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 IGHEP01854 428 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 ZFYP08048 801 aaPredicted RBP4.44□□□□□ -1.7
SKP1-208ENST00000521216 CYP2A7P20853 494 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 TLX1P31314 330 aaPredicted RBP4.44□□□□□ -1.7
SKP1-208ENST00000521216 SOX3P41225 446 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 CSNK2BP67870 215 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 RBP5P82980 135 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 EFTUD2Q15029 972 aaKnown RBP eCLIP4.44□□□□□ -1.77e-8■■■□□ 18.5
SKP1-208ENST00000521216 FGD3Q5JSP0 725 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 MPP7Q5T2T1 576 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 LEKR1Q6ZMV7 388 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 ZNF497Q6ZNH5 498 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 Q6ZRP5 223 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 CHMP1BQ7LBR1 199 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 PHLDB2Q86SQ0 1253 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 FAM89BQ8N5H3 189 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 ZNF519Q8TB69 540 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 GRK7Q8WTQ7 553 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 RIT1Q92963 219 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 WBP2Q969T9 261 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 LINC00479Q96M42 142 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 CCDC114Q96M63 670 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 USP28Q96RU2 1077 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 EGLN3Q9H6Z9 239 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 RAVER2Q9HCJ3 691 aaKnown RBP4.44□□□□□ -1.7
SKP1-208ENST00000521216 ZDHHC18Q9NUE0 388 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 SLC12A6Q9UHW9 1150 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 SELENOKQ9Y6D0 94 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 COLEC10Q9Y6Z7 277 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 IL16Q14005 1332 aa4.44□□□□□ -1.7
SKP1-208ENST00000521216 IGKV3D-15A0A087WSY6 115 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.43□□□□□ -1.7
SKP1-208ENST00000521216 C2CD4DB7Z1M9 353 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 TMEM150CB9EJG8 249 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 PRSS46E5RG02 174 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 ZFAND5O76080 213 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 RLN1P04808 185 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 SERPINB2P05120 415 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 ZNF883P0CG24 379 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 PRKACGP22612 351 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 DUTP33316 252 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms