RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 C7orf72A4D263 438 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 CXCR6O00574 342 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 RFXANKO14593 260 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 MMP20O60882 483 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 KAT7O95251 611 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 CLPTM1O96005 669 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 C1GALT1C1LP0DN25 315 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 MTHFD1P11586 935 aaKnown RBP9.62□□□□□ -0.87
SPARC-202ENST00000520687 HOXB3P14651 431 aaPredicted RBP9.62□□□□□ -0.87
SPARC-202ENST00000520687 C5AR1P21730 350 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 CXCR2P25025 360 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 GJA4P35212 333 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 LTBRP36941 435 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 HPCAL1P37235 193 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 OPRD1P41143 372 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 P2RY2P41231 377 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 PREPP48147 710 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 NEK2P51955 445 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 NR1H2P55055 460 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 MTPNP58546 118 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 TUBA4AP68366 448 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 PGS1Q32NB8 556 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 ITPRIPL2Q3MIP1 535 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 PLA2G4EQ3MJ16 856 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 C6orf52Q5T4I8 152 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 FAM219BQ5XKK7 198 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 R3HCC1LQ7Z5L2 792 aaKnown RBP9.62□□□□□ -0.87
SPARC-202ENST00000520687 RALGPS2Q86X27 583 aaPredicted RBP9.62□□□□□ -0.87
SPARC-202ENST00000520687 ALDH16A1Q8IZ83 802 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 CBR4Q8N4T8 237 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 OXR1Q8N573 874 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 KRTCAP2Q8N6L1 136 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 NATD1Q8N6N6 113 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 OR7G3Q8NG95 312 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 CHTF18Q8WVB6 975 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 SDCCAG3Q96C92 435 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 MTERF3Q96E29 417 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 C11orf24Q96F05 449 aaPredicted RBP9.62□□□□□ -0.87
SPARC-202ENST00000520687 MED8Q96G25 268 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 APIPQ96GX9 242 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 APOLD1Q96LR9 279 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 CNBD2Q96M20 576 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 PHF12Q96QT6 1004 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 RSPH9Q9H1X1 276 aaPredicted RBP9.62□□□□□ -0.87
SPARC-202ENST00000520687 RMI1Q9H9A7 625 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 SERHLQ9NQF3 203 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 ATAD3AQ9NVI7 634 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 ETAA1Q9NY74 926 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 UBAP1Q9NZ09 502 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 CD207Q9UJ71 328 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 ITM2BQ9Y287 266 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 MYRFQ9Y2G1 1151 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 DMDP11532 3685 aa9.62□□□□□ -0.87
SPARC-202ENST00000520687 TMEM202A6NGA9 273 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 E7EQ34 232 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 PRAMEF4O60810 478 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 CCNDBP1O95273 360 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 H6PDO95479 791 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 EPHX1P07099 455 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 HOXB9P17482 250 aaPredicted RBP9.61□□□□□ -0.87
SPARC-202ENST00000520687 MYF6P23409 242 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 ACADLP28330 430 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 OXTRP30559 389 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 GSTM5P46439 218 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 RPS9P46781 194 aaKnown RBP9.61□□□□□ -0.87
SPARC-202ENST00000520687 RXRGP48443 463 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 MERTKQ12866 999 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 CAMK2GQ13555 558 aaPredicted RBP9.61□□□□□ -0.87
SPARC-202ENST00000520687 NRF1Q16656 503 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 RSPO4Q2I0M5 234 aaPredicted RBP9.61□□□□□ -0.87
SPARC-202ENST00000520687 CNPY1Q3B7I2 92 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 POM121L1PQ3SYA9 428 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 KCTD21Q4G0X4 260 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 ATAT1Q5SQI0 421 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 ZNF648Q5T619 568 aaPredicted RBP9.61□□□□□ -0.87
SPARC-202ENST00000520687 PRAMEF9Q5VWM5 478 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 TANGO2Q6ICL3 276 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 PNCKQ6P2M8 343 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 BORAQ6PGQ7 559 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 LCTLQ6UWM7 567 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 VITQ6UXI7 678 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 GET4Q7L5D6 327 aaPredicted RBP9.61□□□□□ -0.87
SPARC-202ENST00000520687 PDZD3Q86UT5 571 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 LRRTM4Q86VH4 590 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 AMZ2Q86W34 360 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 MMAAQ8IVH4 418 aaKnown RBP9.61□□□□□ -0.87
SPARC-202ENST00000520687 DCUN1D3Q8IWE4 304 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 MSRB3Q8IXL7 192 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 SYTL1Q8IYJ3 562 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 KRT78Q8N1N4 520 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 RAB42Q8N4Z0 105 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 ZNF366Q8N895 744 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 OR10A6Q8NH74 314 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 ZFP28Q8NHY6 868 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 ZNF480Q8WV37 535 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 TBC1D20Q96BZ9 403 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 COQ8BQ96D53 544 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 RNF145Q96MT1 663 aa9.61□□□□□ -0.87
SPARC-202ENST00000520687 TSSK3Q96PN8 268 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms