RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 LMLNQ96KR4 655 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 SLC29A3Q9BZD2 475 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 RAB6CQ9H0N0 254 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 ISCUQ9H1K1 167 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 BEX4Q9NWD9 120 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-208ENST00000520228 ZNF69Q9UC07 566 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 CNOT8Q9UFF9 292 aaKnown RBP6.87□□□□□ -1.31
SDCBP-208ENST00000520228 RAB23Q9ULC3 237 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 TMEM98Q9Y2Y6 226 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 SNX10Q9Y5X0 201 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 GREB1Q4ZG55 1949 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 GPR179Q6PRD1 2367 aa6.87□□□□□ -1.31
SDCBP-208ENST00000520228 TICRRQ7Z2Z1 1910 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 IGLV3-10A0A075B6K4 115 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 A0A087X0T9 212 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 C17orf113A0A1B0GUU1 675 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 GAGE10A6NGK3 116 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 E9PAM4 449 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 SOCS2O14508 198 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 AP5Z1O43299 807 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 NDUFB8O95169 186 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 FAM228BP0C875 321 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 GABRG2P18507 467 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 PSMA2P25787 234 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 NR4A2P43354 598 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 CDH4P55283 916 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 ST8SIA6P61647 398 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 ECT2LQ008S8 904 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 ENPP2Q13822 863 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 TWIST1Q15672 202 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 LPAL2Q16609 132 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 CCDC122Q5T0U0 273 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 ALKBH5Q6P6C2 394 aaKnown RBP6.86□□□□□ -1.31
SDCBP-208ENST00000520228 SLFN11Q7Z7L1 901 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 ZNF683Q8IZ20 524 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 DPP10Q8N608 796 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 SUMF1Q8NBK3 374 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 FEM1AQ9BSK4 669 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 ANP32EQ9BTT0 268 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 B3GNT4Q9C0J1 378 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 TMEM245Q9H330 911 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 MRPL47Q9HD33 250 aaKnown RBP6.86□□□□□ -1.31
SDCBP-208ENST00000520228 DECR2Q9NUI1 292 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 MPP6Q9NZW5 540 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 PLEKHB1Q9UF11 243 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-208ENST00000520228 OR12D3Q9UGF7 316 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 INTS6Q9UL03 887 aaKnown RBP6.86□□□□□ -1.31
SDCBP-208ENST00000520228 SCINQ9Y6U3 715 aa6.86□□□□□ -1.31
SDCBP-208ENST00000520228 PATJQ8NI35 1801 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 TMEM272A0A1B0GTI8 110 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 GAGE12JA6NER3 117 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 FAM157AC9JC47 383 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 AKR1B15C9JRZ8 316 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-208ENST00000520228 RHOCP08134 193 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 CDK4P11802 303 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 HLA-EP13747 358 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 OR1E1P30953 314 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 DPP6P42658 865 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 NUMBP49757 651 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 ZNF75DP51815 510 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 PLK1P53350 603 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 OGDHQ02218 1023 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 GFPT1Q06210 699 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-208ENST00000520228 SULT2A1Q06520 285 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 TBX2Q13207 712 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-208ENST00000520228 RWDD4Q6NW29 188 aaKnown RBP6.85□□□□□ -1.31
SDCBP-208ENST00000520228 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-208ENST00000520228 SETD3Q86TU7 594 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-208ENST00000520228 KBTBD6Q86V97 674 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 APCDD1Q8J025 514 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 GHDCQ8N2G8 530 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 CCDC185Q8N715 623 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 TNIP2Q8NFZ5 429 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 ZCCHC10Q8TBK6 192 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 RLN3Q8WXF3 142 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 NTAN1Q96AB6 310 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 RNF125Q96EQ8 232 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 APOPT1Q96IL0 206 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 CCDC42Q96M95 316 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 TRIM7Q9C029 511 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 ZYG11BQ9C0D3 744 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 THAP2Q9H0W7 228 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 FZD3Q9NPG1 666 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 HCN3Q9P1Z3 774 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 SUN2Q9UH99 717 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 SLCO3A1Q9UIG8 710 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 VPS28Q9UK41 221 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 ERVW-1Q9UQF0 538 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 OR51B4Q9Y5P0 310 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 ANAPC1Q9H1A4 1944 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 OBSL1O75147 1896 aa6.85□□□□□ -1.31
SDCBP-208ENST00000520228 RIF1Q5UIP0 2472 aaKnown RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 KMT2EQ8IZD2 1858 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 KIF26AQ9ULI4 1882 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 EP300Q09472 2414 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 ILVBLA1L0T0 632 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 FAM72CH0Y354 149 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 PRPSAP2O60256 369 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 ZNF217O75362 1048 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 RHOBTB1O94844 696 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms