RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SSTR1P30872 391 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 CETN2P41208 172 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 OPCMLQ14982 345 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 HERC3Q15034 1050 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 MAPK11Q15759 364 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 PM20D1Q6GTS8 502 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 PRSS57Q6UWY2 283 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 MARK2Q7KZI7 788 aaKnown RBP4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 PRUNE1Q86TP1 453 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 ISCA2Q86U28 154 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 RNASE8Q8TDE3 154 aaKnown RBP4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 THOC3Q96J01 351 aaKnown RBP4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 EPSTI1Q96J88 318 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 PKP4Q99569 1192 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZNF559Q9BR84 538 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 RHNO1Q9BSD3 238 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 CUEDC2Q9H467 287 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 FAF1Q9UNN5 650 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 TDRKHQ9Y2W6 561 aaKnown RBP4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 TEX264Q9Y6I9 313 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 RNF103-CHMP3A0A140T963 221 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 DENND3A2RUS2 1198 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 H0YIG0 161 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 RNF103O00237 685 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 DFFBO76075 338 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 ABHD2P08910 425 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 DLATP10515 647 aaKnown RBP4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 F3P13726 295 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 ALDH4A1P30038 563 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 IL1RL1Q01638 556 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 PPA1Q15181 289 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 ACKR1Q16570 336 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 TECRLQ5HYJ1 363 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 SPSB3Q6PJ21 355 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 G2E3Q7L622 706 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 CROCCP3Q8IVE0 287 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 RCOR2Q8IZ40 523 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 HDDC3Q8N4P3 179 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 MAB21L3Q8N8X9 362 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 POC1AQ8NBT0 407 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 SLC24A4Q8NFF2 622 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 DMBX1Q8NFW5 382 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 OR13A1Q8NGR1 328 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 OR13C3Q8NGS6 347 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 C4orf45Q96LM5 186 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 PRAM1Q96QH2 718 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 RUFY1Q96T51 708 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 NAP1L3Q99457 506 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 CDCA3Q99618 268 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 CCDC3Q9BQI4 270 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 NACAP1Q9BZK3 213 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 ABCG8Q9H221 673 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 RNF121Q9H920 327 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 RAVER2Q9HCJ3 691 aaKnown RBP4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 TRIM10Q9UDY6 481 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 IL36AQ9UHA7 158 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 SLC12A6Q9UHW9 1150 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 TRMT6Q9UJA5 497 aaKnown RBP4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 GRID1Q9ULK0 1009 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 FOXA2Q9Y261 457 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 RIPK3Q9Y572 518 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 PCDHGB1Q9Y5G3 927 aa4.82□□□□□ -1.64
HMGB1P46-201ENST00000520062 TRBV5-5A0A0J9YX44 114 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 SYCE3A1L190 88 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 ANKDD1BA6NHY2 528 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 CCDC69A6NI79 296 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 GLRA3O75311 464 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 NTN1O95631 604 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 TSHBP01222 138 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 RAF1P04049 648 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 YES1P07947 543 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 PAX1P15863 534 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 MAPK3P27361 379 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 DCTP40126 519 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 CASP9P55211 416 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 CLDN17P56750 224 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 RPP38P78345 283 aaKnown RBP4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 GPR17Q13304 367 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 TSTA3Q13630 321 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 IZUMO4Q1ZYL8 232 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 GPR33Q49SQ1 333 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 XKR6Q5GH73 641 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 XKR3Q5GH77 459 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 TOR1AIP1Q5JTV8 583 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 UGT3A1Q6NUS8 523 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 TOM1L2Q6ZVM7 507 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 MIER3Q7Z3K6 550 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 CPEB2Q7Z5Q1 589 aaKnown RBP4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 ASPGQ86U10 573 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 SERPINA12Q8IW75 414 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 KLHDC1Q8N7A1 406 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 MRPL43Q8N983 215 aaKnown RBP4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 KBTBD3Q8NAB2 608 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 PIK3R3Q92569 461 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 CD101Q93033 1021 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 MARK4Q96L34 752 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 BTBD9Q96Q07 612 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 PRMT1Q99873 361 aaKnown RBP4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 PSD2Q9BQI7 771 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 PITPNM3Q9BZ71 974 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms