RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	GABRR3	A8MPY1	467 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	CLIC1	O00299	241 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	LINC01565	O15544	149 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PRKD3	O94806	890 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	C1QC	P02747	245 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	ANXA4	P09525	319 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	LAMP1	P11279	417 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MYCLP1	P12525	358 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	ATP6V1B1	P15313	513 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	GPX2	P18283	190 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	TIA1	P31483	386 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	MTHFR	P42898	656 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	CAMK2G	Q13555	558 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	CST6	Q15828	149 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	WSCD2	Q2TBF2	565 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	CNPY1	Q3B7I2	92 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	C2orf27A	Q580R0	203 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PAGE2B	Q5JRK9	111 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	TMEM214	Q6NUQ4	689 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	ANKRD54	Q6NXT1	300 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	NXPE4	Q6UWF7	544 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	AMZ2	Q86W34	360 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	OXR1	Q8N573	874 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	SETD7	Q8WTS6	366 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	TMBIM1	Q969X1	311 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	RAD51AP1	Q96B01	352 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	ELSPBP1	Q96BH3	223 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	SLC47A1	Q96FL8	570 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PHF12	Q96QT6	1004 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	KXD1	Q9BQD3	176 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	DUSP26	Q9BV47	211 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	LGR4	Q9BXB1	951 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	NKX2-4	Q9H2Z4	354 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	DMRT3	Q9NQL9	472 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	DNAJB9	Q9UBS3	223 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	SLC23A2	Q9UGH3	650 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	TSC22D4	Q9Y3Q8	395 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	PRKAB1	Q9Y478	270 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	GMEB1	Q9Y692	573 aa		11.93	□□□□□ -0.5
SPIDR-210	ENST00000519362	RANBP2	P49792	3224 aa	Known RBP	11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	DOCK8	Q8NF50	2099 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	TRIM64	A6NGJ6	449 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	EVPLL	A8MZ36	301 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	PI15	O43692	258 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	SERPINA1	P01009	418 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	APOD	P05090	189 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	PCCB	P05166	539 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	ERG	P11308	486 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	HOXB6	P17509	224 aa	Known RBP	11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	NELFE	P18615	380 aa	Known RBP	11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	IDS	P22304	550 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	CAPG	P40121	348 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	ALDH3A2	P51648	485 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	ARSF	P54793	590 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	ADRM1	Q16186	407 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	NADK2	Q4G0N4	442 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	PPP2R2D	Q66LE6	453 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	USP51	Q70EK9	711 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	LRRTM4	Q86VH4	590 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	CLECL1	Q8IZS7	167 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	PGBD3	Q8N328	593 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	TSPAN14	Q8NG11	270 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	NCSTN	Q92542	709 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	FGF14	Q92915	247 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	COQ8B	Q96D53	544 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	RMND5B	Q96G75	393 aa	Predicted RBP	11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	TEX101	Q9BY14	249 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	BTNL2	Q9UIR0	455 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	UTS2R	Q9UKP6	389 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	EXO1	Q9UQ84	846 aa	Known RBP	11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	ASF1A	Q9Y294	204 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362	REV3L	O60673	3130 aa		11.92	□□□□□ -0.5
SPIDR-210	ENST00000519362		H0YAE9	185 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	PCDH7	O60245	1069 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	SH3BGRL	O75368	114 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	OR6B1	O95007	311 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	CCNDBP1	O95273	360 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	KCNK5	O95279	499 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	SNAP29	O95721	258 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	ALPL	P05186	524 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	FES	P07332	822 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	ENG	P17813	658 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	C5AR1	P21730	350 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	KEL	P23276	732 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	GDI1	P31150	447 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	WAS	P42768	502 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	MAGEA10	P43363	369 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	NR1H2	P55055	460 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	ADARB1	P78563	741 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	HYAL1	Q12794	435 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	LAPTM5	Q13571	262 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	HKDC1	Q2TB90	917 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	ITPRIPL2	Q3MIP1	535 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	KCTD21	Q4G0X4	260 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	CPTP	Q5TA50	214 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	METRNL	Q641Q3	311 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms